| Protein: | SYFM_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 429 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SYFM_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
308.0 | [0..1] | [429..1] |
|
Region A: Residues: [1-325] |
1 11 21 31 41 51
| | | | | |
1 MTVFSVQSTI FSRASVALLS SNGFKRFSFV SSFSSSAAYS PPKMRKRRYP IVSAVDIGGV 60
61 AIARNDVVRE DDPTNNVPDS IFSKLGMQLH RRDKHPIGIL KNAIYDYFDS NYSNKFEKFE 120
121 DLSPIVTTKQ NFDDVLVPAD HVSRSLNDTY YVDSQTVLRC HTSAHQAELL RKGHSRFLVT 180
181 GDVYRRDSID STHYPVFHQM EGFCVFSPED WNGSGKDSTL YAAEDLKKCL EGLARHLFGS 240
241 VEMRWVDTYF PFTNPSFELE IYFKEDWLEV LGCGVTEQVI LKQSGLENNV AWAFGLGLER 300
301 LAMVLFDIPD IRFFWSSDER FTSQF
|
| Detection Method: |  |
| Confidence: | 55.39794 |
| Match: | 1b70A |
| Description: | Phenyl-tRNA synthetase (PheRS) alpha subunit, PheS |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| ligase activity, forming aminoacyl-tRNA and related compounds | 7.89468709683036 | bayes_pls_golite062009 |
| ligase activity, forming carbon-oxygen bonds | 7.89468709683036 | bayes_pls_golite062009 |
| aminoacyl-tRNA ligase activity | 7.88410036819636 | bayes_pls_golite062009 |
| phenylalanine-tRNA ligase activity | 7.1807508219467 | bayes_pls_golite062009 |
| ligase activity | 6.92073480193262 | bayes_pls_golite062009 |
| serine-tRNA ligase activity | 2.46505535069103 | bayes_pls_golite062009 |
| glycine-tRNA ligase activity | 2.29229136935761 | bayes_pls_golite062009 |
| threonine-tRNA ligase activity | 2.18642354927 | bayes_pls_golite062009 |
| catalytic activity | 1.99372273395202 | bayes_pls_golite062009 |
| alanine-tRNA ligase activity | 1.82594054955281 | bayes_pls_golite062009 |
| lysine-tRNA ligase activity | 1.72324031407565 | bayes_pls_golite062009 |
| histidine-tRNA ligase activity | 1.72215103383322 | bayes_pls_golite062009 |
| binding | 0.966824335333342 | bayes_pls_golite062009 |
| asparagine-tRNA ligase activity | 0.921492123574877 | bayes_pls_golite062009 |
| transcription regulator activity | 0.375542987753806 | bayes_pls_golite062009 |
| nucleic acid binding | 0.281662799812287 | bayes_pls_golite062009 |
| protein binding | 0.0804954454681041 | bayes_pls_golite062009 |
| DNA binding | 0.0309732052586011 | bayes_pls_golite062009 |
| RNA binding | 0.0221706730298825 | bayes_pls_golite062009 |
| aspartate-tRNA ligase activity | 0.00572514744734753 | bayes_pls_golite062009 |
|
Region A: Residues: [326-429] |
1 11 21 31 41 51
| | | | | |
1 GKGELGVKFK PYSKYPPCYK DISFWISDLF TENNFCEVVR GIAGDLVEEV KLIDQFTNKK 60
61 KGLTSHCYRI VFRSMERSLT DEEVNDLQSK VRDEVQKKLN VELR
|
| Detection Method: | |
| Confidence: | 4.69897 |
| Match: | 1nj8A |
| Description: | Prolyl-tRNA synthetase (ProRS) domain; C-terminal domain of ProRS; Prolyl-tRNA synthetase (ProRS) |
Matching Structure (courtesy of the PDB): |
|
