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View Structure Prediction Details

Protein: QORL_ARATH
Organism: Arabidopsis thaliana
Length: 386 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for QORL_ARATH.

Description E-value Query
Range		 Subject
Range
gi|2983768, gi|1... - gi|2983768|gb|AAC07327.1| alcohol dehydrogenase [Aquifex aeolicus VF5], gi|15606558|ref|NP_213938.1|...
gi|7427649 - pir||C70418 probable alcohol dehydrogenase (EC 1.1.1.-) - Aquifex aeolicus
 272.0 [0..78] [384..1]

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Predicted Domain #1
Region A:
Residues: [1-75] 
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNAALATTTA TTPVLRRETP LLHYCSLTTK SPVYQINRVR FGSCVQTVSK KFLKISASSQ  60
   61 SASAAVNVTA DASIP

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 4.045757
Match: 2fr0A
Description: No description for 2fr0A was found.

Predicted Domain #2
Region A:
Residues: [76-386] 
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 KEMKAWVYSD YGGVDVLKLE SNIVVPEIKE DQVLIKVVAA ALNPVDAKRR QGKFKATDSP  60
   61 LPTVPGYDVA GVVVKVGSAV KDLKEGDEVY ANVSEKALEG PKQFGSLAEY TAVEEKLLAL 120
  121 KPKNIDFAQA AGLPLAIETA DEGLVRTEFS AGKSILVLNG AGGVGSLVIQ LAKHVYGASK 180
  181 VAATASTEKL ELVRSLGADL AIDYTKENIE DLPDKYDVVF DAIGMCDKAV KVIKEGGKVV 240
  241 ALTGAVTPPG FRFVVTSNGD VLKKLNPYIE SGKVKPVVDP KGPFPFSRVA DAFSYLETNH 300
  301 ATGKVVVYPI P

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 70.39794
Match: 1rjwA
Description: CRYSTAL STRUCTURE OF NAD(+)-DEPENDENT ALCOHOL DEHYDROGENASE FROM BACILLUS STEAROTHERMOPHILUS STRAIN LLD-R
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
oxidoreductase activity 4.14217990101505 bayes_pls_golite062009
alcohol dehydrogenase (NAD) activity 2.94416173750168 bayes_pls_golite062009
oxidoreductase activity, acting on CH-OH group of donors 2.27417613545298 bayes_pls_golite062009
alcohol dehydrogenase activity, zinc-dependent 2.26153457113968 bayes_pls_golite062009
oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor 2.0836009784049 bayes_pls_golite062009
catalytic activity 1.79741889688267 bayes_pls_golite062009
oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor 1.22416351603098 bayes_pls_golite062009
chaperone binding 1.04678886151518 bayes_pls_golite062009
retinol dehydrogenase activity 1.04497968922284 bayes_pls_golite062009
monovalent inorganic cation transmembrane transporter activity 0.905392379451071 bayes_pls_golite062009
transporter activity 0.793769336118517 bayes_pls_golite062009
transmembrane transporter activity 0.635891484075352 bayes_pls_golite062009
substrate-specific transporter activity 0.555188550031886 bayes_pls_golite062009
binding 0.553666136934364 bayes_pls_golite062009
oxidoreductase activity, acting on NADH or NADPH 0.51503848775098 bayes_pls_golite062009
protein binding 0.507836099271263 bayes_pls_golite062009
coenzyme binding 0.46570602169425 bayes_pls_golite062009
NAD or NADH binding 0.46286018152257 bayes_pls_golite062009
molecular transducer activity 0.435382281024944 bayes_pls_golite062009
signal transducer activity 0.435382281024944 bayes_pls_golite062009
substrate-specific transmembrane transporter activity 0.410307505174239 bayes_pls_golite062009
ion transmembrane transporter activity 0.29802814097478 bayes_pls_golite062009
hydrogen ion transmembrane transporter activity 0.261132005311306 bayes_pls_golite062009
active transmembrane transporter activity 0.239024094835991 bayes_pls_golite062009
receptor activity 0.219998435023684 bayes_pls_golite062009
cation transmembrane transporter activity 0.212092278332619 bayes_pls_golite062009
nucleic acid binding 0.204320937203153 bayes_pls_golite062009
metal ion transmembrane transporter activity 0.178823255212317 bayes_pls_golite062009
G-protein coupled receptor activity 0.135469305070471 bayes_pls_golite062009
nucleoside-triphosphatase activity 0.113340150368917 bayes_pls_golite062009
pyrophosphatase activity 0.0696058100530442 bayes_pls_golite062009
hydrolase activity, acting on acid anhydrides 0.0591634687578807 bayes_pls_golite062009
hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides 0.0560606007580392 bayes_pls_golite062009
transmembrane receptor activity 0.0180992866169776 bayes_pls_golite062009
gated channel activity 0.015794644474568 bayes_pls_golite062009
YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle