Protein: | Nmdar2-PC |
Organism: | Drosophila melanogaster |
Length: | 1083 amino acids |
Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Nmdar2-PC.
Description | E-value | Query Range |
Subject Range |
|
573.0 | [0..1] | [1070..1] |
Region A: Residues: [1-76] |
1 11 21 31 41 51 | | | | | | 1 MMPSRVKLKR GTDGPTPTPT PMPTTMRKHT PIATLNTASC QHNSTTSRRK RILTPPSGPI 60 61 SLLLLTVLTL LILDTR |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
Region A: Residues: [77-597] |
1 11 21 31 41 51 | | | | | | 1 SCQGLRLTNG GGSLSKGAAA NKEQLNIGLI APHTNFGKRE YLRSINNAVT GLTKTRGAKL 60 61 TFLKDYSFEQ KNIHFDMMSL TPSPTAILST LCKEFLRVNV SAILYMMNNE QFGHSTASAQ 120 121 YFLQLAGYLG IPVISWNADN SGLERRASQS TLQLQLAPSI EHQSAAMLSI LERYKWHQFS 180 181 VVTSQIAGHD DFVQAVRERV AEMQEHFKFT ILNSIVVTRT SDLMELVNSE ARVMLLYATQ 240 241 TEAITILRAA EEMKLTGENY VWVVSQSVIE KKDAHSQFPV GMLGVHFDTS SAALMNEISN 300 301 AIKIYSYGVE AYLTDPANRD RRLTTQSLSC EDEGRGRWDN GEIFFKYLRN VSIEGDLNKP 360 361 NIEFTADGDL RSAELKIMNL RPSANNKNLV WEEIGVWKSW ETQKLDIRDI AWPGNSHAPP 420 421 QGVPEKFHLK ITFLEEAPYI NLSPADPVSG KCLMDRGVLC RVAADHEMAA DIDVGQAHRN 480 481 ESFYQCCSGF CIDLLEKFAE ELGFTYELVR VEDGKWGTLE N |
Detection Method: | |
Confidence: | 43.39794 |
Match: | 2e4uA |
Description: | No description for 2e4uA was found. |
Region A: Residues: [598-686] |
1 11 21 31 41 51 | | | | | | 1 GKWNGLIADL VNRKTDMVLT SLMINTEREA VVDFSEPFME TGIAIVVAKR TGIISPTAFL 60 61 EPFDTASWML VGIVAIQAAT FMIFLFEWL |
Detection Method: | |
Confidence: | 5.0 |
Match: | 1hpbP |
Description: | Histidine-binding protein |
Matching Structure (courtesy of the PDB): |
Region A: Residues: [687-905] |
1 11 21 31 41 51 | | | | | | 1 SPSGYDMKLY LQNTNVTPYR FSLFRTYWLV WAVLFQAAVH VDSPRGFTSR FMTNVWALFA 60 61 VVFLAIYTAN LAAFMITREE FHEFSGLNDS RLVHPFSHKP SFKFGTIPYS HTDSTIHKYF 120 121 NVMHNYMRQY NKTSVADGVA AVLNGNLDSF IYDGTVLDYL VAQDEDCRLM TVGSWYAMTG 180 181 YGLAFSRNSK YVQMFNKRLL EFRANGDLER LRRYWMTGT |
Detection Method: | |
Confidence: | 15.39794 |
Match: | 1pb7A |
Description: | N-methyl-D-aspartate receptor subunit 1 |
Matching Structure (courtesy of the PDB): |
Term | Confidence | Notes |
substrate-specific transmembrane transporter activity | 4.68307627076676 | bayes_pls_golite062009 |
ion transmembrane transporter activity | 4.22641590829276 | bayes_pls_golite062009 |
amine binding | 4.11747486942823 | bayes_pls_golite062009 |
transporter activity | 3.92658561501282 | bayes_pls_golite062009 |
transmembrane transporter activity | 3.71430307970333 | bayes_pls_golite062009 |
metal ion transmembrane transporter activity | 3.45211068541539 | bayes_pls_golite062009 |
substrate-specific transporter activity | 3.34421502810243 | bayes_pls_golite062009 |
primary active transmembrane transporter activity | 3.33883206510679 | bayes_pls_golite062009 |
P-P-bond-hydrolysis-driven transmembrane transporter activity | 3.33572158012752 | bayes_pls_golite062009 |
hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances | 3.31947078781945 | bayes_pls_golite062009 |
ATPase activity, coupled to transmembrane movement of substances | 3.3164655425684 | bayes_pls_golite062009 |
ATPase activity, coupled to movement of substances | 3.3159417475856 | bayes_pls_golite062009 |
active transmembrane transporter activity | 3.25041295044206 | bayes_pls_golite062009 |
transcription regulator activity | 3.03357847562258 | bayes_pls_golite062009 |
cation transmembrane transporter activity | 2.86948925100516 | bayes_pls_golite062009 |
ATPase activity, coupled | 2.65558937563899 | bayes_pls_golite062009 |
ATPase activity, coupled to transmembrane movement of ions | 2.62312131886704 | bayes_pls_golite062009 |
DNA binding | 2.61012484342623 | bayes_pls_golite062009 |
transcription factor activity | 2.5357143320124 | bayes_pls_golite062009 |
nucleic acid binding | 2.48797963503537 | bayes_pls_golite062009 |
nucleoside-triphosphatase activity | 2.36995601057551 | bayes_pls_golite062009 |
ATPase activity | 2.35388655037218 | bayes_pls_golite062009 |
pyrophosphatase activity | 2.29319753274625 | bayes_pls_golite062009 |
hydrolase activity, acting on acid anhydrides | 2.27317031628667 | bayes_pls_golite062009 |
hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides | 2.27090852909065 | bayes_pls_golite062009 |
inorganic cation transmembrane transporter activity | 2.24148099938567 | bayes_pls_golite062009 |
binding | 2.20249180444367 | bayes_pls_golite062009 |
anion transmembrane transporter activity | 2.18878964063845 | bayes_pls_golite062009 |
inorganic anion transmembrane transporter activity | 2.17975065094225 | bayes_pls_golite062009 |
peptide binding | 2.13614935733644 | bayes_pls_golite062009 |
anion transmembrane-transporting ATPase activity | 1.78891156577149 | bayes_pls_golite062009 |
receptor activity | 1.74349172783363 | bayes_pls_golite062009 |
di-, tri-valent inorganic cation transmembrane transporter activity | 1.64195930233359 | bayes_pls_golite062009 |
molecular transducer activity | 1.44487216360172 | bayes_pls_golite062009 |
signal transducer activity | 1.44487216360172 | bayes_pls_golite062009 |
transition metal ion transmembrane transporter activity | 1.12761240844996 | bayes_pls_golite062009 |
transcription activator activity | 1.0083098653988 | bayes_pls_golite062009 |
hydrolase activity | 0.999095648881488 | bayes_pls_golite062009 |
protein binding | 0.782435650956845 | bayes_pls_golite062009 |
catalytic activity | 0.674312982669564 | bayes_pls_golite062009 |
molybdate transmembrane-transporting ATPase activity | 0.480504240439005 | bayes_pls_golite062009 |
molybdate ion transmembrane transporter activity | 0.480504240439005 | bayes_pls_golite062009 |
amine transmembrane transporter activity | 0.372828805396439 | bayes_pls_golite062009 |
iron ion transmembrane transporter activity | 0.311100382163719 | bayes_pls_golite062009 |
transition metal ion binding | 0.263323904110968 | bayes_pls_golite062009 |
Region A: Residues: [906-984] |
1 11 21 31 41 51 | | | | | | 1 CRPGKQEHKS SDPLALEQFL SAFLLLMAGI LLAALLLLLE HVYFKYIRKR LAKKDGGHCC 60 61 ALISLSMGKS LTFRGAVFE |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
Region A: Residues: [985-1083] |
1 11 21 31 41 51 | | | | | | 1 ATEILKKHRC NDPICDTHLW KVKHELDMSR LRVRQLEKVM DKHGIKAPQL RLASSSDLLN 60 61 HHHLKERPPL LGNLSLAASA QDLYRWSYKT EIAEMETVL |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.