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View MS Result Peptides

Run Information:

Bait Protein: RPA135
Hit Protein: RPB2
Protein Desc: RNA polymerase II second largest subunit B150, part of central core; similar to bacterial beta subun...
Sequence Coverage: 52.5%
Organism: Saccharomyces cerevisiae
MS Run: View Run


Sequence Coverage:

Hit Protein
Sequence:
[NCBI BLAST]
[ProtParam]
       1          11         21         31         41         51         
       |          |          |          |          |          |          
    1  MSDLANSEKY YDEDPYGFED ESAPITAEDS WAVISAFFRE KGLVSQQLDS FNQFVDYTLQ  60
   61  DIICEDSTLI LEQLAQHTTE SDNISRKYEI SFGKIYVTKP MVNESDGVTH ALYPQEARLR 120
  121  NLTYSSGLFV DVKKRTYEAI DVPGRELKYE LIAEESEDDS ESGKVFIGRL PIMLRSKNCY 180
  181  LSEATESDLY KLKECPFDMG GYFIINGSEK VLIAQERSAG NIVQVFKKAA PSPISHVAEI 240
  241  RSALEKGSRF ISTLQVKLYG REGSSARTIK ATLPYIKQDI PIVIIFRALG IIPDGEILEH 300
  301  ICYDVNDWQM LEMLKPCVED GFVIQDRETA LDFIGRRGTA LGIKKEKRIQ YAKDILQKEF 360
  361  LPHITQLEGF ESRKAFFLGY MINRLLLCAL DRKDQDDRDH FGKKRLDLAG PLLAQLFKTL 420
  421  FKKLTKDIFR YMQRTVEEAH DFNMKLAINA KTITSGLKYA LATGNWGEQK KAMSSRAGVS 480
  481  QVLNRYTYSS TLSHLRRTNT PIGRDGKLAK PRQLHNTHWG LVCPAETPEG QACGLVKNLS 540
  541  LMSCISVGTD PMPIITFLSE WGMEPLEDYV PHQSPDATRV FVNGVWHGVH RNPARLMETL 600
  601  RTLRRKGDIN PEVSMIRDIR EKELKIFTDA GRVYRPLFIV EDDESLGHKE LKVRKGHIAK 660
  661  LMATEYQDIE GGFEDVEEYT WSSLLNEGLV EYIDAEEEES ILIAMQPEDL EPAEANEEND 720
  721  LDVDPAKRIR VSHHATTFTH CEIHPSMILG VAASIIPFPD HNQSPRNTYQ SAMGKQAMGV 780
  781  FLTNYNVRMD TMANILYYPQ KPLGTTRAME YLKFRELPAG QNAIVAIACY SGYNQEDSMI 840
  841  MNQSSIDRGL FRSLFFRSYM DQEKKYGMSI TETFEKPQRT NTLRMKHGTY DKLDDDGLIA 900
  901  PGVRVSGEDV IIGKTTPISP DEEELGQRTA YHSKRDASTP LRSTENGIVD QVLVTTNQDG 960
  961  LKFVKVRVRT TKIPQIGDKF ASRHGQKGTI GITYRREDMP FTAEGIVPDL IINPHAIPSR1020
 1021  MTVAHLIECL LSKVAALSGN EGDASPFTDI TVEGISKLLR EHGYQSRGFE VMYNGHTGKK1080
 1081  LMAQIFFGPT YYQRLRHMVD DKIHARARGP MQVLTRQPVE GRSRDGGLRF GEMERDCMIA1140
 1141  HGAASFLKER LMEASDAFRV HICGICGLMT VIAKLNHNQF ECKGCDNKID IYQIHIPYAA1200
 1201  KLLFQELMAM NITPRLYTDR SRDF

Run Result Peptides:

XCorr Delta CN M+H+ Total
Intensity
Sp
Rank
Ion
Prop.
Red. Sequence
[No Spectrum] 5.1575 0.4542 3493.18 10503.2 1 32.8 1 K.YYDEDPYGFEDESAPITAEDSWAVISAFFR.E
[No Spectrum] 6.1508 0.5526 3750.52 5892.4 1 31.5 4 K.YYDEDPYGFEDESAPITAEDSWAVISAFFREK.G
[No Spectrum] 3.754 0.3975 1811.91 9091.6 1 73.3 1 A.PITAEDSWAVISAFFR.E
[No Spectrum] 3.4915 0.3284 2067.91 9386.3 3 47.1 1 A.PITAEDSWAVISAFFREK.G
[No Spectrum] 2.715 0.3286 971.66 4669.6 1 78.6 2 R.KYEISFGK.I
[No Spectrum] 5.687 0.4898 3672.25 9563.8 1 25.8 2 R.KYEISFGKIYVTKPMVNESDGVTHALYPQEAR.L
[No Spectrum] 5.5618 0.5478 2718.95 6406.0 1 47.8 1 K.IYVTKPMVNESDGVTHALYPQEAR.L
[No Spectrum] 4.9551 0.5121 2719.12 5320.2 1 32.6 2 K.IYVTKPMVNESDGVTHALYPQEAR.L
[No Spectrum] 5.0535 0.4017 1712.96 4757.5 1 82.1 6 R.LRNLTYSSGLFVDVK.K
[No Spectrum] 3.7126 0.2896 1714.02 7072.3 1 50.0 2 R.LRNLTYSSGLFVDVK.K
[No Spectrum] 4.3307 0.2366 3558.39 8115.8 1 26.7 2 K.KRTYEAIDVPGRELKYELIAEESEDDSESGK.V
[No Spectrum] 5.7057 0.5671 3274.15 7640.6 1 33.9 1 R.TYEAIDVPGRELKYELIAEESEDDSESGK.V
[No Spectrum] 5.5353 0.5085 1802.29 7297.9 1 80.0 1 K.YELIAEESEDDSESGK.V
[No Spectrum] 3.3093 0.2102 1315.88 9786.3 1 75.0 1 K.VFIGRLPIMLR.S
[No Spectrum] 4.8619 0.4371 1695.06 6923.6 1 88.5 2 K.NCYLSEATESDLYK.L
[No Spectrum] 5.0627 0.5081 2206.65 6291.5 1 61.1 2 K.LKECPFDMGGYFIINGSEK.V
[No Spectrum] 3.7021 0.1551 2208.07 6190.5 1 43.1 1 K.LKECPFDMGGYFIINGSEK.V
[No Spectrum] 3.0667 0.1683 1965.7 7167.5 1 71.9 1 K.ECPFDMGGYFIINGSEK.V
[No Spectrum] 3.6174 0.3183 1063.36 5565.5 1 88.9 1 R.SAGNIVQVFK.K
[No Spectrum] 3.664 0.3424 1191.63 6215.1 1 80.0 1 R.SAGNIVQVFKK.A
[No Spectrum] 4.0981 0.4698 1477.02 7362.5 1 84.6 1 K.KAAPSPISHVAEIR.S
[No Spectrum] 4.9341 0.5297 1478.84 7907.2 1 48.1 1 K.KAAPSPISHVAEIR.S
[No Spectrum] 2.3063 0.1741 1347.63 6637.8 3 50.0 1 K.AAPSPISHVAEIR.S
[No Spectrum] 3.3695 0.5154 1349.86 4398.4 1 70.8 1 K.AAPSPISHVAEIR.S
[No Spectrum] 3.4436 0.2289 1236.89 6698.1 1 75.0 1 K.GSRFISTLQVK.L
[No Spectrum] 4.3582 0.3491 2002.09 5827.8 1 68.8 2 K.ATLPYIKQDIPIVIIFR.A
[No Spectrum] 4.4745 0.2931 2002.13 5617.9 1 43.8 1 K.ATLPYIKQDIPIVIIFR.A
[No Spectrum] 3.5875 0.403 1804.07 6858.0 1 71.4 1 K.EFLPHITQLEGFESR.K
[No Spectrum] 3.59 0.157 1934.54 5688.5 1 41.7 1 K.EFLPHITQLEGFESRK.A
[No Spectrum] 4.0301 0.3867 1338.69 7139.7 1 81.8 1 K.YALATGNWGEQK.K
[No Spectrum] 3.7769 0.3629 1466.67 7341.7 1 75.0 1 K.YALATGNWGEQKK.A
[No Spectrum] 3.0378 0.229 944.84 7838.8 1 87.5 1 R.AGVSQVLNR.Y
[No Spectrum] 5.7223 0.5797 2251.92 10766.3 1 46.1 1 R.AGVSQVLNRYTYSSTLSHLR.R
[No Spectrum] 3.9634 0.427 2256.33 9817.9 1 42.1 2 R.AGVSQVLNRYTYSSTLSHLR.R
[No Spectrum] 3.4666 0.4504 2027.28 11311.4 1 43.8 1 V.SQVLNRYTYSSTLSHLR.R
[No Spectrum] 4.6681 0.2204 2804.41 6225.2 1 30.2 1 R.QLHNTHWGLVCPAETPEGQACGLVK.N
[No Spectrum] 3.9905 0.524 1407.72 6794.0 1 81.8 2 R.VFVNGVWHGVHR.N
[No Spectrum] 3.9182 0.3108 1515.91 5554.7 1 70.8 1 R.RKGDINPEVSMIR.D
[No Spectrum] 3.6761 0.3384 2778.89 6056.9 1 28.3 1 K.IFTDAGRVYRPLFIVEDDESLGHK.E
[No Spectrum] 3.7234 0.2792 3151.3 7942.4 2 25.0 1 K.IFTDAGRVYRPLFIVEDDESLGHKELK.V
[No Spectrum] 5.1224 0.4455 2018.84 8761.5 1 68.8 2 R.VYRPLFIVEDDESLGHK.E
[No Spectrum] 5.071 0.3593 2019.26 6857.3 1 46.9 2 R.VYRPLFIVEDDESLGHK.E
[No Spectrum] 4.8685 0.4198 2389.02 8363.6 1 55.3 1 R.VYRPLFIVEDDESLGHKELK.V
[No Spectrum] 6.0684 0.4381 2389.07 10551.7 1 46.1 2 R.VYRPLFIVEDDESLGHKELK.V
[No Spectrum] 3.7158 0.4446 1514.56 6210.0 1 79.2 2 K.QAMGVFLTNYNVR.M
[No Spectrum] 3.5998 0.3319 2214.77 6172.8 1 41.7 1 R.MDTMANILYYPQKPLGTTR.A
[No Spectrum] 4.3998 0.4188 2215.27 7826.5 1 43.1 2 R.MDTMANILYYPQKPLGTTR.A
[No Spectrum] 7.0973 0.5259 3950.94 11259.2 1 27.9 1 K.FRELPAGQNAIVAIACYSGYNQEDSMIMNQSSIDR.G
[No Spectrum] 4.512 0.5496 1815.78 7123.8 1 71.4 2 K.KYGMSITETFEKPQR.T
[No Spectrum] 3.2782 0.4539 1687.96 7503.5 1 50.0 1 K.YGMSITETFEKPQR.T
[No Spectrum] 5.9423 0.4635 1942.68 9122.6 1 70.6 1 K.HGTYDKLDDDGLIAPGVR.V
[No Spectrum] 4.4233 0.3645 1944.65 6257.6 1 45.6 1 K.HGTYDKLDDDGLIAPGVR.V
[No Spectrum] 5.258 0.4443 2940.49 10133.8 1 31.5 2 K.HGTYDKLDDDGLIAPGVRVSGEDVIIGK.T
[No Spectrum] 2.1618 0.2266 1016.65 8772.9 2 66.7 1 R.VSGEDVIIGK.T
[No Spectrum] 3.6215 0.3598 1017.38 5932.8 2 88.9 1 R.VSGEDVIIGK.T
[No Spectrum] 5.2846 0.4641 2569.99 6724.0 1 54.3 1 R.VSGEDVIIGKTTPISPDEEELGQR.T
[No Spectrum] 5.7703 0.3345 2571.51 9162.2 1 38.0 1 R.VSGEDVIIGKTTPISPDEEELGQR.T
[No Spectrum] 4.9372 0.3894 2872.66 7277.4 1 30.8 4 R.DASTPLRSTENGIVDQVLVTTNQDGLK.F
[No Spectrum] 4.6247 0.5368 2131.81 6429.0 1 63.2 8 R.STENGIVDQVLVTTNQDGLK.F
[No Spectrum] 5.0432 0.3319 2134.38 7517.0 1 38.2 2 R.STENGIVDQVLVTTNQDGLK.F
[No Spectrum] 4.5121 0.444 3651.52 7774.0 1 23.4 1 K.GTIGITYRREDMPFTAEGIVPDLIINPHAIPSR.M
[No Spectrum] 7.4264 0.4478 2792.92 7124.9 1 47.9 1 R.REDMPFTAEGIVPDLIINPHAIPSR.M
[No Spectrum] 3.6701 0.3669 1515.97 4418.1 1 50.0 1 R.MTVAHLIECLLSK.V
[No Spectrum] 4.3646 0.3891 1516.94 7258.6 1 87.5 2 R.MTVAHLIECLLSK.V
[No Spectrum] 5.6883 0.6236 2378.31 5680.9 1 54.3 2 K.VAALSGNEGDASPFTDITVEGISK.L
[No Spectrum] 3.5438 0.3182 1468.6 6777.7 1 70.8 1 R.GFEVMYNGHTGKK.L
[No Spectrum] 4.6935 0.3715 1863.81 6821.7 1 75.0 1 K.KLMAQIFFGPTYYQR.L
[No Spectrum] 5.0787 0.366 1864.04 9629.3 1 48.2 1 K.KLMAQIFFGPTYYQR.L
[No Spectrum] 4.6699 0.338 1737.06 6294.2 1 76.9 1 K.LMAQIFFGPTYYQR.L
[No Spectrum] 3.2404 0.2262 1129.82 6696.9 1 83.3 1 R.ARGPMQVLTR.Q
[No Spectrum] 3.9177 0.3983 1798.89 4417.3 1 43.3 1 R.ARGPMQVLTRQPVEGR.S
[No Spectrum] 4.5004 0.3937 1568.77 7204.2 1 50.0 1 R.GPMQVLTRQPVEGR.S
[No Spectrum] 3.1677 0.2084 1569.04 7948.8 10 50.0 1 R.GPMQVLTRQPVEGR.S
[No Spectrum] 4.4487 0.3951 2172.0 8429.1 1 38.9 1 R.FGEMERDCMIAHGAASFLK.E
[No Spectrum] 5.2171 0.337 3291.7 7957.0 1 27.9 3 K.LNHNQFECKGCDNKIDIYQIHIPYAAK.L
[No Spectrum] 4.4661 0.3658 2119.98 5875.0 1 52.9 1 K.GCDNKIDIYQIHIPYAAK.L
[No Spectrum] 5.1808 0.3867 2120.92 7879.6 1 54.4 1 K.GCDNKIDIYQIHIPYAAK.L
[No Spectrum] 3.1491 0.322 1546.32 8737.6 1 58.3 1 K.IDIYQIHIPYAAK.L

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle