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View Protein Complex Details

Complex Overview

From Publication: Qiu J, Noble WS (2008) Predicting Co-Complexed Protein Pairs from Heterogeneous Data. PLoS Comput Biol 4(4): e1000054. doi:10.1371/journal.pcbi.1000054
Notes: Classifier used Gene Ontology annotations. [FDR: 0.038] [SVM Score: 0.885943801103]
Complex Size: 2 proteins

Complex Member Proteins

Cellular Component Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

polysome 6.0632E-6 2 16 2 6292
ribonucleoprotein complex 6.6615E-3 2 514 2 6292

Biological Process Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

translational frameshifting 3.0316E-7 2 4 2 6292
nuclear-transcribed mRNA catabolic process, nonsense-mediated decay 2.779E-6 2 11 2 6292
nuclear-transcribed mRNA catabolic process 3.552E-5 2 38 2 6292
regulation of translation 8.0641E-5 2 57 2 6292
posttranscriptional regulation of gene expression 9.2464E-5 2 61 2 6292
regulation of cellular protein metabolic process 1.151E-4 2 68 2 6292
mRNA catabolic process 1.1854E-4 2 69 2 6292
regulation of protein metabolic process 1.3647E-4 2 74 2 6292
RNA catabolic process 1.5966E-4 2 80 2 6292
regulation of translational termination 9.5344E-4 2 3 1 6292
mRNA metabolic process 1.1408E-3 2 213 2 6292
cellular macromolecule catabolic process 1.7674E-3 2 265 2 6292
anatomical structure homeostasis 2.0592E-3 2 286 2 6292
telomere organization 2.0592E-3 2 286 2 6292
telomere maintenance 2.0592E-3 2 286 2 6292
macromolecule catabolic process 2.1762E-3 2 294 2 6292
translational termination 2.5415E-3 2 8 1 6292
regulation of protein complex disassembly 3.1764E-3 2 10 1 6292
translation 3.5621E-3 2 376 2 6292
homeostatic process 4.1951E-3 2 408 2 6292
cellular catabolic process 4.3405E-3 2 415 2 6292
regulation of gene expression 4.9915E-3 2 445 2 6292
regulation of macromolecule biosynthetic process 5.2416E-3 2 456 2 6292
regulation of cellular biosynthetic process 5.6164E-3 2 472 2 6292
regulation of biosynthetic process 5.6402E-3 2 473 2 6292
regulation of macromolecule metabolic process 6.004E-3 2 488 2 6292
catabolic process 6.2027E-3 2 496 2 6292
regulation of primary metabolic process 6.6615E-3 2 514 2 6292
regulation of cellular metabolic process 7.2445E-3 2 536 2 6292
regulation of metabolic process 7.5452E-3 2 547 2 6292
regulation of biological quality 7.6561E-3 2 551 2 6292
chromosome organization 7.7677E-3 2 555 2 6292
DNA metabolic process 8.631E-3 2 585 2 6292

Molecular Function Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

ATP-dependent RNA helicase activity 8.8811E-3 2 28 1 6292
RNA-dependent ATPase activity 9.1975E-3 2 29 1 6292

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle