| From Publication: | Qiu J, Noble WS (2008) Predicting Co-Complexed Protein Pairs from Heterogeneous Data. PLoS Comput Biol 4(4): e1000054. doi:10.1371/journal.pcbi.1000054 |
| Notes: | Classifier used Gene Ontology annotations. [FDR: 0.02] [SVM Score: 1.02868029838] |
| Complex Size: | 2 proteins |
| Protein |
GO Cellular Component | GO Biological Process | GO Molecular Function |
| SAC6 |
|
|
|
| VRP1 |
|
|
|
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| actin cortical patch | 4.1432E-5 | 2 | 41 | 2 | 6292 |
| cortical actin cytoskeleton | 6.6999E-5 | 2 | 52 | 2 | 6292 |
| cortical cytoskeleton | 6.6999E-5 | 2 | 52 | 2 | 6292 |
| actin cytoskeleton | 1.8038E-4 | 2 | 85 | 2 | 6292 |
| cell cortex part | 2.304E-4 | 2 | 96 | 2 | 6292 |
| cell cortex | 2.974E-4 | 2 | 109 | 2 | 6292 |
| cytoskeletal part | 1.0156E-3 | 2 | 201 | 2 | 6292 |
| cytoskeleton | 1.1732E-3 | 2 | 216 | 2 | 6292 |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| actin binding | 1.0611E-5 | 2 | 21 | 2 | 6292 |
| cytoskeletal protein binding | 8.6451E-5 | 2 | 59 | 2 | 6292 |
| actin filament binding | 3.811E-3 | 2 | 12 | 1 | 6292 |
| protein binding, bridging | 6.3477E-3 | 2 | 20 | 1 | 6292 |
| protein binding | 9.4468E-3 | 2 | 612 | 2 | 6292 |