From Publication: | Qiu J, Noble WS (2008) Predicting Co-Complexed Protein Pairs from Heterogeneous Data. PLoS Comput Biol 4(4): e1000054. doi:10.1371/journal.pcbi.1000054 |
Notes: | Classfier did not use Gene Ontology annotations. [FDR: 0.091] [SVM Score: 0.310234801774] |
Complex Size: | 2 proteins |
Protein |
GO Cellular Component | GO Biological Process | GO Molecular Function |
CDC14 |
|
|
|
CSM1 |
|
|
|
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
GO Term |
P-value |
A |
B |
I |
T |
nucleolus | 1.1194E-3 | 2 | 211 | 2 | 6292 |
RENT complex | 1.2712E-3 | 2 | 4 | 1 | 6292 |
chromatin silencing complex | 2.859E-3 | 2 | 9 | 1 | 6292 |
nuclear lumen | 5.1728E-3 | 2 | 453 | 2 | 6292 |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
GO Term |
P-value |
A |
B |
I |
T |
homologous chromosome segregation | 1.5888E-3 | 2 | 5 | 1 | 6292 |
M phase | 2.1762E-3 | 2 | 294 | 2 | 6292 |
cell cycle phase | 3.5621E-3 | 2 | 376 | 2 | 6292 |
meiotic chromosome segregation | 5.0798E-3 | 2 | 16 | 1 | 6292 |
cell cycle process | 6.0534E-3 | 2 | 490 | 2 | 6292 |
cell cycle | 6.95E-3 | 2 | 525 | 2 | 6292 |
regulation of exit from mitosis | 7.9314E-3 | 2 | 25 | 1 | 6292 |
exit from mitosis | 7.9314E-3 | 2 | 25 | 1 | 6292 |
protein amino acid dephosphorylation | 8.8811E-3 | 2 | 28 | 1 | 6292 |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
GO Term |
P-value |
A |
B |
I |
T |