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View Protein Complex Details

Complex Overview

From Publication: Qiu J, Noble WS (2008) Predicting Co-Complexed Protein Pairs from Heterogeneous Data. PLoS Comput Biol 4(4): e1000054. doi:10.1371/journal.pcbi.1000054
Notes: Classfier did not use Gene Ontology annotations. [FDR: 0.021] [SVM Score: 0.429059460697]
Complex Size: 2 proteins

Complex Member Proteins

Cellular Component Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

NatB complex 9.5344E-4 2 3 1 6292
N-terminal protein acetyltransferase complex 2.859E-3 2 9 1 6292
protein acetyltransferase complex 2.859E-3 2 9 1 6292

Biological Process Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

organelle localization 1.8038E-4 2 85 2 6292
N-terminal peptidyl-methionine acetylation 1.2712E-3 2 4 1 6292
peptidyl-methionine modification 1.2712E-3 2 4 1 6292
anatomical structure homeostasis 2.0592E-3 2 286 2 6292
telomere organization 2.0592E-3 2 286 2 6292
telomere maintenance 2.0592E-3 2 286 2 6292
ribosomal small subunit export from nucleus 2.224E-3 2 7 1 6292
N-terminal protein amino acid acetylation 3.1764E-3 2 10 1 6292
homeostatic process 4.1951E-3 2 408 2 6292
peptide or protein amino-terminal blocking 4.7627E-3 2 15 1 6292
N-terminal protein amino acid modification 4.7627E-3 2 15 1 6292
regulation of biological quality 7.6561E-3 2 551 2 6292
chromosome organization 7.7677E-3 2 555 2 6292
ribosomal small subunit biogenesis 8.248E-3 2 26 1 6292
establishment of ribosome localization 8.248E-3 2 26 1 6292
ribosome localization 8.248E-3 2 26 1 6292
ribosomal subunit export from nucleus 8.248E-3 2 26 1 6292
peptidyl-amino acid modification 8.5646E-3 2 27 1 6292
DNA metabolic process 8.631E-3 2 585 2 6292
mitochondrion inheritance 9.1975E-3 2 29 1 6292
mitochondrion distribution 9.1975E-3 2 29 1 6292
mitochondrion localization 9.5139E-3 2 30 1 6292

Molecular Function Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

peptide alpha-N-acetyltransferase activity 3.1764E-3 2 10 1 6292
peptide N-acetyltransferase activity 3.1764E-3 2 10 1 6292

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle