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View Protein Complex Details

Complex Overview

From Publication: Ho Y. et al. (2002) Systematic identification of protein complexes in Saccharomyces cerevisiae by mass spectrometry. Nature. 2002 Jan 10;415(6868):180-3.
Notes: This molecular complex record represents a population of complexes co-purified by immunoprecipitation of FLAG-tagged Fpr1. The topolgies of protein complexes in this experiment are unknown.
Complex Size: 10 proteins

Complex Member Proteins

Cellular Component Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

6-phosphofructokinase complex 3.1764E-3 10 2 1 6292
cytoplasm 3.2692E-3 10 3552 10 6292
mitochondrion 3.5136E-3 10 1125 6 6292

Biological Process Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

small molecule metabolic process 3.1532E-5 10 760 7 6292
homoserine metabolic process 4.7546E-5 10 7 2 6292
carboxylic acid metabolic process 8.1467E-5 10 333 5 6292
organic acid metabolic process 8.1467E-5 10 333 5 6292
oxoacid metabolic process 8.1467E-5 10 333 5 6292
cellular ketone metabolic process 9.789E-5 10 346 5 6292
cellular amino acid metabolic process 1.7555E-4 10 199 4 6292
cellular amine metabolic process 2.6791E-4 10 222 4 6292
amine metabolic process 3.7923E-4 10 243 4 6292
cellular amino acid and derivative metabolic process 3.7923E-4 10 243 4 6292
cellular biosynthetic process 3.9961E-4 10 1567 8 6292
primary metabolic process 4.2311E-4 10 2896 10 6292
biosynthetic process 4.7103E-4 10 1602 8 6292
nucleobase biosynthetic process 5.6509E-4 10 23 2 6292
cellular metabolic process 6.7219E-4 10 3033 10 6292
serine family amino acid metabolic process 7.8132E-4 10 27 2 6292
metabolic process 1.0041E-3 10 3157 10 6292
tRNA aminoacylation for protein translation 1.1694E-3 10 33 2 6292
nucleobase metabolic process 1.1694E-3 10 33 2 6292
tRNA aminoacylation 1.1694E-3 10 33 2 6292
amino acid activation 1.1694E-3 10 33 2 6292
alanyl-tRNA aminoacylation 1.5893E-3 10 1 1 6292
translation 1.975E-3 10 376 4 6292
arginyl-tRNA aminoacylation 3.1764E-3 10 2 1 6292
homoserine biosynthetic process 4.7611E-3 10 3 1 6292
cellular nitrogen compound biosynthetic process 5.842E-3 10 247 3 6292
cellular aromatic compound metabolic process 6.8891E-3 10 81 2 6292
cellular nitrogen compound metabolic process 7.1615E-3 10 1770 7 6292
nitrogen compound metabolic process 7.6901E-3 10 1791 7 6292
nucleobase, nucleoside, nucleotide and nucleic acid biosynthetic process 8.4509E-3 10 90 2 6292
nucleobase, nucleoside and nucleotide biosynthetic process 8.4509E-3 10 90 2 6292

Molecular Function Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

aminoacyl-tRNA ligase activity 2.3692E-5 10 38 3 6292
ligase activity, forming carbon-oxygen bonds 2.3692E-5 10 38 3 6292
ligase activity, forming aminoacyl-tRNA and related compounds 2.3692E-5 10 38 3 6292
ligase activity 5.8285E-5 10 150 4 6292
alanine-tRNA ligase activity 1.5893E-3 10 1 1 6292
aspartate kinase activity 1.5893E-3 10 1 1 6292
dihydroorotate dehydrogenase activity 1.5893E-3 10 1 1 6292
6-phosphofructokinase activity 3.1764E-3 10 2 1 6292
methylenetetrahydrofolate dehydrogenase (NADP+) activity 3.1764E-3 10 2 1 6292
arginine-tRNA ligase activity 3.1764E-3 10 2 1 6292
methenyltetrahydrofolate cyclohydrolase activity 3.1764E-3 10 2 1 6292
formate-tetrahydrofolate ligase activity 3.1764E-3 10 2 1 6292
threonine-tRNA ligase activity 3.1764E-3 10 2 1 6292
catalytic activity 4.0379E-3 10 2150 8 6292
methylenetetrahydrofolate dehydrogenase activity 4.7611E-3 10 3 1 6292
amino acid kinase activity 4.7611E-3 10 3 1 6292
phosphotransferase activity, carboxyl group as acceptor 7.9239E-3 10 5 1 6292
phosphofructokinase activity 9.5019E-3 10 6 1 6292

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle