YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Protein Complex Details

Complex Overview

From Publication: Ho Y. et al. (2002) Systematic identification of protein complexes in Saccharomyces cerevisiae by mass spectrometry. Nature. 2002 Jan 10;415(6868):180-3.
Notes: This molecular complex record represents a population of complexes co-purified by immunoprecipitation of FLAG-tagged Swm1. The topolgies of protein complexes in this experiment are unknown.
Complex Size: 9 proteins

Complex Member Proteins

Cellular Component Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

carbamoyl-phosphate synthase complex 2.859E-3 9 2 1 6292
fungal-type vacuole lumen 9.9746E-3 9 7 1 6292
Arp2/3 protein complex 9.9746E-3 9 7 1 6292

Biological Process Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

pyrimidine ribonucleoside triphosphate metabolic process 2.859E-3 9 2 1 6292
CTP metabolic process 2.859E-3 9 2 1 6292
pyrimidine ribonucleotide metabolic process 2.859E-3 9 2 1 6292
pyrimidine ribonucleoside triphosphate biosynthetic process 2.859E-3 9 2 1 6292
pyrimidine ribonucleotide biosynthetic process 2.859E-3 9 2 1 6292
CTP biosynthetic process 2.859E-3 9 2 1 6292
cis assembly of pre-catalytic spliceosome 2.859E-3 9 2 1 6292
cellular nitrogen compound biosynthetic process 4.2105E-3 9 247 3 6292
nuclear mRNA cis splicing, via spliceosome 4.2857E-3 9 3 1 6292
pyrimidine nucleoside triphosphate biosynthetic process 4.2857E-3 9 3 1 6292
cellular aromatic compound metabolic process 5.5575E-3 9 81 2 6292
pyrimidine nucleoside triphosphate metabolic process 5.7106E-3 9 4 1 6292
pyrimidine ribonucleoside metabolic process 5.7106E-3 9 4 1 6292
small molecule biosynthetic process 7.969E-3 9 310 3 6292
pyrimidine nucleotide biosynthetic process 8.5551E-3 9 6 1 6292

Molecular Function Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

3-dehydroquinate dehydratase activity 1.4304E-3 9 1 1 6292
3-dehydroquinate synthase activity 1.4304E-3 9 1 1 6292
shikimate 5-dehydrogenase activity 1.4304E-3 9 1 1 6292
3-phosphoshikimate 1-carboxyvinyltransferase activity 1.4304E-3 9 1 1 6292
shikimate kinase activity 1.4304E-3 9 1 1 6292
CTP synthase activity 2.859E-3 9 2 1 6292
carbon-oxygen lyase activity, acting on phosphates 4.2857E-3 9 3 1 6292
carbamoyl-phosphate synthase activity 4.2857E-3 9 3 1 6292
carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity 4.2857E-3 9 3 1 6292
serine-type endopeptidase activity 5.7106E-3 9 4 1 6292
ligase activity, forming carbon-nitrogen bonds 7.4253E-3 9 94 2 6292
serine-type peptidase activity 8.5551E-3 9 6 1 6292

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle