YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Protein Complex Details

Complex Overview

From Publication: Ho Y. et al. (2002) Systematic identification of protein complexes in Saccharomyces cerevisiae by mass spectrometry. Nature. 2002 Jan 10;415(6868):180-3.
Notes: This molecular complex record represents a population of complexes co-purified by immunoprecipitation of FLAG-tagged Hpr1. The topolgies of protein complexes in this experiment are unknown.
Complex Size: 5 proteins

Complex Member Proteins

Cellular Component Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

THO complex 9.6371E-10 5 4 3 6292
transcription export complex 3.1756E-3 5 4 1 6292
nuclear part 4.0435E-3 5 1103 4 6292
protein complex 4.5433E-3 5 1137 4 6292
Cdc73/Paf1 complex 6.3431E-3 5 8 1 6292

Biological Process Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

mRNA transport 6.1904E-8 5 68 4 6292
mRNA export from nucleus 6.1904E-8 5 68 4 6292
RNA export from nucleus 1.2004E-7 5 80 4 6292
RNA transport 1.2626E-7 5 81 4 6292
nucleic acid transport 1.2626E-7 5 81 4 6292
establishment of RNA localization 1.2626E-7 5 81 4 6292
RNA localization 2.1174E-7 5 92 4 6292
nucleobase, nucleoside, nucleotide and nucleic acid transport 2.5161E-7 5 96 4 6292
nuclear export 3.3457E-7 5 103 4 6292
nuclear transport 8.5656E-7 5 130 4 6292
nucleocytoplasmic transport 8.5656E-7 5 130 4 6292
RNA elongation from RNA polymerase II promoter 2.1835E-6 5 39 3 6292
RNA elongation 3.3854E-6 5 45 3 6292
DNA recombination 5.6425E-5 5 114 3 6292
macromolecule localization 7.4222E-5 5 397 4 6292
transcription, DNA-dependent 1.8916E-4 5 503 4 6292
RNA biosynthetic process 1.9668E-4 5 508 4 6292
transcription 2.7282E-4 5 552 4 6292
intracellular transport 2.7477E-4 5 553 4 6292
establishment of localization in cell 3.7618E-4 5 599 4 6292
cellular localization 4.9681E-4 5 643 4 6292
transcription from RNA polymerase II promoter 1.3805E-3 5 335 3 6292
RNA metabolic process 2.3107E-3 5 954 4 6292
transport 2.7399E-3 5 997 4 6292
establishment of localization 2.8585E-3 5 1008 4 6292
localization 3.47E-3 5 1060 4 6292
cellular macromolecule biosynthetic process 5.3579E-3 5 1187 4 6292
macromolecule biosynthetic process 5.3925E-3 5 1189 4 6292
cellular macromolecule metabolic process 6.2991E-3 5 2285 5 6292
DNA metabolic process 6.9303E-3 5 585 3 6292
gene expression 7.2106E-3 5 1283 4 6292
macromolecule metabolic process 7.2329E-3 5 2349 5 6292

Molecular Function Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

binding 3.6564E-4 5 1294 5 6292
nucleic acid binding 5.7016E-4 5 666 4 6292
chaperone activator activity 2.3825E-3 5 3 1 6292
ATPase activator activity 5.552E-3 5 7 1 6292
ATPase regulator activity 8.7135E-3 5 11 1 6292

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle