YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Protein Complex Details

Complex Overview

From Publication: Ho Y. et al. (2002) Systematic identification of protein complexes in Saccharomyces cerevisiae by mass spectrometry. Nature. 2002 Jan 10;415(6868):180-3.
Notes: This molecular complex record represents a population of complexes co-purified by immunoprecipitation of FLAG-tagged Ydl175c. The topolgies of protein complexes in this experiment are unknown.
Complex Size: 8 proteins

Complex Member Proteins

Cellular Component Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

TRAMP complex 5.0773E-3 8 4 1 6292

Biological Process Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

nuclear transport 4.474E-4 8 130 3 6292
nucleocytoplasmic transport 4.474E-4 8 130 3 6292
energy derivation by oxidation of organic compounds 6.6794E-4 8 149 3 6292
generation of precursor metabolites and energy 1.4631E-3 8 195 3 6292
seryl-tRNA aminoacylation 2.5415E-3 8 2 1 6292
mRNA transport 3.0901E-3 8 68 2 6292
mRNA export from nucleus 3.0901E-3 8 68 2 6292
RNA export from nucleus 4.2539E-3 8 80 2 6292
RNA transport 4.3588E-3 8 81 2 6292
nucleic acid transport 4.3588E-3 8 81 2 6292
establishment of RNA localization 4.3588E-3 8 81 2 6292
aerobic respiration 4.5722E-3 8 83 2 6292
tRNA catabolic process 5.0773E-3 8 4 1 6292
RNA localization 5.5921E-3 8 92 2 6292
nucleobase, nucleoside, nucleotide and nucleic acid transport 6.0761E-3 8 96 2 6292
cellular respiration 6.2001E-3 8 97 2 6292
snRNA catabolic process 6.3431E-3 8 5 1 6292
snoRNA catabolic process 6.3431E-3 8 5 1 6292
nuclear export 6.9683E-3 8 103 2 6292
ncRNA polyadenylation 7.6075E-3 8 6 1 6292
ncRNA polyadenylation involved in polyadenylation-dependent ncRNA catabolic process 7.6075E-3 8 6 1 6292
rRNA catabolic process 7.6075E-3 8 6 1 6292
ncRNA catabolic process 7.6075E-3 8 6 1 6292
tRNA metabolic process 9.3692E-3 8 120 2 6292
translation 9.4607E-3 8 376 3 6292

Molecular Function Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

serine-tRNA ligase activity 2.5415E-3 8 2 1 6292
poly(A) RNA binding 6.3431E-3 8 5 1 6292
single-stranded RNA binding 6.3431E-3 8 5 1 6292
poly-purine tract binding 6.3431E-3 8 5 1 6292
polynucleotide adenylyltransferase activity 7.6075E-3 8 6 1 6292
alcohol dehydrogenase (NAD) activity 8.8705E-3 8 7 1 6292

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle