| From Publication: | Ho Y. et al. (2002) Systematic identification of protein complexes in Saccharomyces cerevisiae by mass spectrometry. Nature. 2002 Jan 10;415(6868):180-3. |
| Notes: | This molecular complex record represents a population of complexes co-purified by immunoprecipitation of FLAG-tagged Ypr093c. The topolgies of protein complexes in this experiment are unknown. |
| Complex Size: | 7 proteins |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| DNA-directed RNA polymerase II, core complex | 2.6474E-10 | 7 | 12 | 4 | 6292 |
| RNA polymerase complex | 1.6706E-8 | 7 | 31 | 4 | 6292 |
| nuclear DNA-directed RNA polymerase complex | 1.6706E-8 | 7 | 31 | 4 | 6292 |
| DNA-directed RNA polymerase complex | 1.6706E-8 | 7 | 31 | 4 | 6292 |
| DNA-directed RNA polymerase II, holoenzyme | 1.9315E-7 | 7 | 56 | 4 | 6292 |
| nucleoplasm part | 7.1578E-5 | 7 | 245 | 4 | 6292 |
| nucleoplasm | 9.5953E-5 | 7 | 264 | 4 | 6292 |
| nuclear lumen | 7.7894E-4 | 7 | 453 | 4 | 6292 |
| protein complex | 2.9048E-3 | 7 | 1137 | 5 | 6292 |
| organelle lumen | 3.2392E-3 | 7 | 660 | 4 | 6292 |
| intracellular organelle lumen | 3.2392E-3 | 7 | 660 | 4 | 6292 |
| membrane-enclosed lumen | 4.0336E-3 | 7 | 700 | 4 | 6292 |
| nucleus | 5.8629E-3 | 7 | 2041 | 6 | 6292 |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| transcription from RNA polymerase II promoter | 2.4308E-4 | 7 | 335 | 4 | 6292 |
| transcription, DNA-dependent | 1.162E-3 | 7 | 503 | 4 | 6292 |
| RNA biosynthetic process | 1.2065E-3 | 7 | 508 | 4 | 6292 |
| transcription | 1.6538E-3 | 7 | 552 | 4 | 6292 |
| transcription-coupled nucleotide-excision repair | 2.224E-3 | 7 | 2 | 1 | 6292 |
| response to ethanol | 2.224E-3 | 7 | 2 | 1 | 6292 |
| homoserine metabolic process | 7.7654E-3 | 7 | 7 | 1 | 6292 |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| RNA polymerase activity | 2.4595E-8 | 7 | 34 | 4 | 6292 |
| DNA-directed RNA polymerase activity | 2.4595E-8 | 7 | 34 | 4 | 6292 |
| nucleotidyltransferase activity | 1.6125E-5 | 7 | 168 | 4 | 6292 |
| transferase activity, transferring phosphorus-containing groups | 5.8266E-4 | 7 | 420 | 4 | 6292 |
| transferase activity | 6.5162E-3 | 7 | 797 | 4 | 6292 |