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View Protein Complex Details

Complex Overview

From Publication: Ho Y. et al. (2002) Systematic identification of protein complexes in Saccharomyces cerevisiae by mass spectrometry. Nature. 2002 Jan 10;415(6868):180-3.
Notes: This molecular complex record represents a population of complexes co-purified by immunoprecipitation of FLAG-tagged Rfc2. The topolgies of protein complexes in this experiment are unknown.
Complex Size: 7 proteins

Complex Member Proteins

Cellular Component Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

carbamoyl-phosphate synthase complex 2.224E-3 7 2 1 6292

Biological Process Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

glucose 6-phosphate metabolic process 2.224E-3 7 2 1 6292
glucose 1-phosphate metabolic process 2.224E-3 7 2 1 6292
UDP-glucose metabolic process 3.3344E-3 7 3 1 6292
small molecule metabolic process 5.47E-3 7 760 4 6292
galactose catabolic process 5.552E-3 7 5 1 6292
trehalose biosynthetic process 6.6592E-3 7 6 1 6292
glycoside biosynthetic process 6.6592E-3 7 6 1 6292
disaccharide biosynthetic process 6.6592E-3 7 6 1 6292
acetate metabolic process 7.7654E-3 7 7 1 6292
nucleotide-sugar metabolic process 7.7654E-3 7 7 1 6292
trehalose metabolic process 9.9746E-3 7 9 1 6292
calcium ion homeostasis 9.9746E-3 7 9 1 6292
cellular calcium ion homeostasis 9.9746E-3 7 9 1 6292

Molecular Function Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

phosphoribosylformylglycinamidine cyclo-ligase activity 1.1125E-3 7 1 1 6292
acetyl-CoA hydrolase activity 1.1125E-3 7 1 1 6292
phosphoribosylamine-glycine ligase activity 1.1125E-3 7 1 1 6292
phosphoglucomutase activity 2.224E-3 7 2 1 6292
carbamoyl-phosphate synthase activity 3.3344E-3 7 3 1 6292
carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity 3.3344E-3 7 3 1 6292
cyclo-ligase activity 3.3344E-3 7 3 1 6292
CoA hydrolase activity 3.3344E-3 7 3 1 6292
ligase activity, forming carbon-nitrogen bonds 4.4166E-3 7 94 2 6292
intramolecular transferase activity, phosphotransferases 7.7654E-3 7 7 1 6292
DNA clamp loader activity 7.7654E-3 7 7 1 6292
protein-DNA loading ATPase activity 7.7654E-3 7 7 1 6292
catalytic activity 7.8491E-3 7 2150 6 6292
protein transmembrane transporter activity 9.9746E-3 7 9 1 6292
macromolecule transmembrane transporter activity 9.9746E-3 7 9 1 6292
thiolester hydrolase activity 9.9746E-3 7 9 1 6292
carbon-nitrogen ligase activity, with glutamine as amido-N-donor 9.9746E-3 7 9 1 6292

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle