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View Protein Complex Details

Complex Overview

From Publication: Gavin A.C. et al. (2006) Proteome survey reveals modularity of the yeast cell machinery. Nature. 2006 Mar 30;440(7084):631-6. Epub 2006 Jan 22.
Notes: From the published set of protein complexes (core proteins only)
Complex Size: 3 proteins

Complex Member Proteins

Cellular Component Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

CCR4-NOT core complex 3.8101E-3 3 8 1 6292
CCR4-NOT complex 6.6614E-3 3 14 1 6292

Biological Process Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

small-subunit processome assembly 4.768E-4 3 1 1 6292
ncRNA 5'-end processing 1.4299E-3 3 3 1 6292
endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA) 1.4299E-3 3 3 1 6292
rRNA 5'-end processing 1.4299E-3 3 3 1 6292
RNA 5'-end processing 1.4299E-3 3 3 1 6292
endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) 1.4299E-3 3 3 1 6292
maturation of 5.8S rRNA 1.9063E-3 3 4 1 6292
cleavage involved in rRNA processing 1.9063E-3 3 4 1 6292
maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) 1.9063E-3 3 4 1 6292
endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) 1.9063E-3 3 4 1 6292
endonucleolytic cleavage of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) 1.9063E-3 3 4 1 6292
endonucleolytic cleavage involved in rRNA processing 1.9063E-3 3 4 1 6292
nuclear-transcribed mRNA poly(A) tail shortening 3.8101E-3 3 8 1 6292
maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) 6.1865E-3 3 13 1 6292
ribosomal small subunit assembly 6.6614E-3 3 14 1 6292
gene expression 8.4626E-3 3 1283 3 6292

Molecular Function Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

rRNA primary transcript binding 2.3825E-3 3 5 1 6292
rRNA binding 7.6106E-3 3 16 1 6292

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle