| From Publication: | Gavin A.C. et al. (2006) Proteome survey reveals modularity of the yeast cell machinery. Nature. 2006 Mar 30;440(7084):631-6. Epub 2006 Jan 22. |
| Notes: | From the published set of protein complexes (core proteins only) |
| Complex Size: | 6 proteins |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| nucleolus | 1.3269E-9 | 6 | 211 | 6 | 6292 |
| nuclear lumen | 1.3504E-7 | 6 | 453 | 6 | 6292 |
| Noc1p-Noc2p complex | 7.579E-7 | 6 | 2 | 2 | 6292 |
| organelle lumen | 1.3052E-6 | 6 | 660 | 6 | 6292 |
| intracellular organelle lumen | 1.3052E-6 | 6 | 660 | 6 | 6292 |
| membrane-enclosed lumen | 1.8602E-6 | 6 | 700 | 6 | 6292 |
| Noc complex | 7.5694E-6 | 6 | 5 | 2 | 6292 |
| non-membrane-bounded organelle | 1.2371E-5 | 6 | 959 | 6 | 6292 |
| intracellular non-membrane-bounded organelle | 1.2371E-5 | 6 | 959 | 6 | 6292 |
| preribosome, large subunit precursor | 2.7204E-5 | 6 | 9 | 2 | 6292 |
| nuclear part | 2.8697E-5 | 6 | 1103 | 6 | 6292 |
| 90S preribosome | 1.0242E-4 | 6 | 17 | 2 | 6292 |
| preribosome | 4.1945E-4 | 6 | 34 | 2 | 6292 |
| nucleolar part | 7.3675E-4 | 6 | 45 | 2 | 6292 |
| nucleus | 1.1592E-3 | 6 | 2041 | 6 | 6292 |
| Noc2p-Noc3p complex | 1.9064E-3 | 6 | 2 | 1 | 6292 |
| organelle part | 2.2664E-3 | 6 | 2282 | 6 | 6292 |
| intracellular organelle part | 2.2664E-3 | 6 | 2282 | 6 | 6292 |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| ribosome biogenesis | 2.6536E-8 | 6 | 346 | 6 | 6292 |
| ribonucleoprotein complex biogenesis | 4.2465E-8 | 6 | 374 | 6 | 6292 |
| cellular component biogenesis | 1.7662E-6 | 6 | 694 | 6 | 6292 |
| ribosome assembly | 1.9646E-5 | 6 | 64 | 3 | 6292 |
| organelle assembly | 2.4661E-5 | 6 | 69 | 3 | 6292 |
| ribonucleoprotein complex assembly | 5.862E-5 | 6 | 92 | 3 | 6292 |
| cellular macromolecular complex assembly | 4.465E-4 | 6 | 182 | 3 | 6292 |
| ribosomal large subunit assembly | 6.1127E-4 | 6 | 41 | 2 | 6292 |
| ribosomal subunit assembly | 1.1004E-3 | 6 | 55 | 2 | 6292 |
| cellular macromolecular complex subunit organization | 1.2572E-3 | 6 | 259 | 3 | 6292 |
| ribosomal large subunit biogenesis | 1.5348E-3 | 6 | 65 | 2 | 6292 |
| macromolecular complex assembly | 1.5941E-3 | 6 | 281 | 3 | 6292 |
| macromolecular complex subunit organization | 3.1855E-3 | 6 | 357 | 3 | 6292 |
| cellular component assembly | 3.9564E-3 | 6 | 385 | 3 | 6292 |
| regulation of transcription, mating-type specific | 4.7604E-3 | 6 | 5 | 1 | 6292 |
| rRNA processing | 5.8384E-3 | 6 | 128 | 2 | 6292 |
| rRNA metabolic process | 6.6661E-3 | 6 | 137 | 2 | 6292 |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| 5S rRNA binding | 1.9064E-3 | 6 | 2 | 1 | 6292 |
| RNA binding | 3.4488E-3 | 6 | 367 | 3 | 6292 |
| rRNA primary transcript binding | 4.7604E-3 | 6 | 5 | 1 | 6292 |