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View Protein Complex Details

Complex Overview

From Publication: Gavin A.C. et al. (2006) Proteome survey reveals modularity of the yeast cell machinery. Nature. 2006 Mar 30;440(7084):631-6. Epub 2006 Jan 22.
Notes: From the published set of protein complexes (core proteins only)
Complex Size: 4 proteins

Complex Member Proteins

Cellular Component Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

DNA replication factor A complex 1.9063E-3 4 3 1 6292
nuclear chromosome 7.4744E-3 4 228 2 6292

Biological Process Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

DNA repair 8.4103E-7 4 192 4 6292
response to DNA damage stimulus 1.9311E-6 4 236 4 6292
cellular response to stress 4.4241E-6 4 290 4 6292
cellular response to stimulus 1.2969E-5 4 379 4 6292
telomere maintenance via recombination 3.6271E-5 4 16 2 6292
response to stress 3.8497E-5 4 497 4 6292
postreplication repair 4.6226E-5 4 18 2 6292
double-strand break repair via homologous recombination 6.9734E-5 4 22 2 6292
DNA metabolic process 7.4032E-5 4 585 4 6292
recombinational repair 9.8027E-5 4 26 2 6292
mitotic recombination 1.5902E-4 4 33 2 6292
response to stimulus 2.1816E-4 4 766 4 6292
double-strand break repair 4.7822E-4 4 57 2 6292
meiosis I 9.1886E-4 4 79 2 6292
DNA recombination 1.9066E-3 4 114 2 6292
nucleic acid metabolic process 2.5494E-3 4 1415 4 6292
DNA replication, synthesis of RNA primer 3.1756E-3 4 5 1 6292
M phase of meiotic cell cycle 3.7283E-3 4 160 2 6292
meiosis 3.7283E-3 4 160 2 6292
DNA recombinase assembly 3.8098E-3 4 6 1 6292
meiotic DNA recombinase assembly 3.8098E-3 4 6 1 6292
nucleobase, nucleoside, nucleotide and nucleic acid metabolic process 3.8261E-3 4 1566 4 6292
meiotic cell cycle 3.9142E-3 4 164 2 6292
double-strand break repair via synthesis-dependent strand annealing 4.4437E-3 4 7 1 6292
meiotic mismatch repair 5.7106E-3 4 9 1 6292
double-strand break repair via break-induced replication 5.7106E-3 4 9 1 6292
double-strand break repair via single-strand annealing 5.7106E-3 4 9 1 6292
cellular nitrogen compound metabolic process 6.2471E-3 4 1770 4 6292
nitrogen compound metabolic process 6.5492E-3 4 1791 4 6292
DNA unwinding involved in replication 8.8726E-3 4 14 1 6292

Molecular Function Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

structure-specific DNA binding 1.2704E-6 4 44 3 6292
single-stranded DNA binding 3.6271E-5 4 16 2 6292
double-stranded DNA binding 7.6359E-5 4 23 2 6292
DNA binding 2.5835E-4 4 256 3 6292
3'-5' DNA helicase activity 1.2712E-3 4 2 1 6292
single base insertion or deletion binding 1.2712E-3 4 2 1 6292
guanine/thymine mispair binding 1.9063E-3 4 3 1 6292
DNA strand annealing activity 2.5411E-3 4 4 1 6292
four-way junction DNA binding 2.5411E-3 4 4 1 6292
recombinase activity 2.5411E-3 4 4 1 6292
mismatched DNA binding 3.1756E-3 4 5 1 6292
DNA insertion or deletion binding 3.1756E-3 4 5 1 6292
nucleic acid binding 4.351E-3 4 666 3 6292
DNA secondary structure binding 5.7106E-3 4 9 1 6292
damaged DNA binding 6.9763E-3 4 11 1 6292

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