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View Protein Complex Details

Complex Overview

From Publication: Krogan N. J. et al. (2006) Global landscape of protein complexes in the yeast Saccharomyces cerevisiae. Nature. 2006 Mar 30;440(7084):637-43. Epub 2006 Mar 22.
Notes: From the published set of core protein complex predictions.
Complex Size: 3 proteins

Complex Member Proteins

Cellular Component Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

carbamoyl-phosphate synthase complex 1.5158E-7 3 2 2 6292

Biological Process Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

glutamine family amino acid metabolic process 2.974E-7 3 43 3 6292
arginine biosynthetic process 8.329E-6 3 11 2 6292
arginine metabolic process 1.8163E-5 3 16 2 6292
cellular amino acid metabolic process 3.1176E-5 3 199 3 6292
cellular amine metabolic process 4.3352E-5 3 222 3 6292
amine metabolic process 5.6922E-5 3 243 3 6292
cellular amino acid and derivative metabolic process 5.6922E-5 3 243 3 6292
glutamine family amino acid biosynthetic process 5.7139E-5 3 28 2 6292
cellular nitrogen compound biosynthetic process 5.9791E-5 3 247 3 6292
small molecule biosynthetic process 1.185E-4 3 310 3 6292
organic acid metabolic process 1.4698E-4 3 333 3 6292
oxoacid metabolic process 1.4698E-4 3 333 3 6292
carboxylic acid metabolic process 1.4698E-4 3 333 3 6292
cellular ketone metabolic process 1.6493E-4 3 346 3 6292
glutamine metabolic process 9.5344E-4 3 2 1 6292
cellular amino acid biosynthetic process 9.6474E-4 3 114 2 6292
amine biosynthetic process 1.1046E-3 3 122 2 6292
organic acid biosynthetic process 1.4327E-3 3 139 2 6292
carboxylic acid biosynthetic process 1.4327E-3 3 139 2 6292
small molecule metabolic process 1.7562E-3 3 760 3 6292
'de novo' pyrimidine base biosynthetic process 6.1865E-3 3 13 1 6292
pyrimidine base biosynthetic process 7.6106E-3 3 16 1 6292
pyrimidine base metabolic process 8.5592E-3 3 18 1 6292

Molecular Function Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

carbamoyl-phosphate synthase activity 2.4099E-11 3 3 3 6292
carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity 2.4099E-11 3 3 3 6292
carbon-nitrogen ligase activity, with glutamine as amido-N-donor 2.0243E-9 3 9 3 6292
ligase activity, forming carbon-nitrogen bonds 3.2303E-6 3 94 3 6292
ligase activity 1.3286E-5 3 150 3 6292
aspartate carbamoyltransferase activity 4.768E-4 3 1 1 6292
carboxyl- or carbamoyltransferase activity 1.4299E-3 3 3 1 6292

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle