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View Protein Complex Details

Complex Overview

From Publication: Krogan N. J. et al. (2006) Global landscape of protein complexes in the yeast Saccharomyces cerevisiae. Nature. 2006 Mar 30;440(7084):637-43. Epub 2006 Mar 22.
Notes: From the published set of core protein complex predictions.
Complex Size: 5 proteins

Complex Member Proteins

Cellular Component Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

clathrin-coated vesicle 2.3279E-4 5 31 2 6292
coated vesicle 1.6756E-3 5 83 2 6292
cytoplasmic vesicle 2.7709E-3 5 107 2 6292
membrane-bounded vesicle 2.7709E-3 5 107 2 6292
cytoplasmic membrane-bounded vesicle 2.7709E-3 5 107 2 6292
vesicle 2.9264E-3 5 110 2 6292
trans-Golgi network transport vesicle 8.7135E-3 5 11 1 6292

Biological Process Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

cell wall chitin metabolic process 2.887E-8 5 10 3 6292
cell wall polysaccharide metabolic process 5.2903E-8 5 12 3 6292
aminoglycan metabolic process 6.8758E-8 5 13 3 6292
chitin metabolic process 6.8758E-8 5 13 3 6292
cell wall macromolecule metabolic process 4.8532E-7 5 24 3 6292
Golgi to plasma membrane transport 1.076E-6 5 31 3 6292
polysaccharide metabolic process 8.1348E-6 5 60 3 6292
amine metabolic process 1.0531E-5 5 243 4 6292
post-Golgi vesicle-mediated transport 1.1891E-5 5 68 3 6292
cell wall chitin biosynthetic process 1.8149E-5 5 9 2 6292
cell wall polysaccharide biosynthetic process 1.8149E-5 5 9 2 6292
cell wall biogenesis 1.9438E-5 5 80 3 6292
aminoglycan biosynthetic process 2.771E-5 5 11 2 6292
chitin biosynthetic process 2.771E-5 5 11 2 6292
cell wall macromolecule biosynthetic process 1.1598E-4 5 22 2 6292
cellular component macromolecule biosynthetic process 1.1598E-4 5 22 2 6292
cellular cell wall macromolecule metabolic process 1.2698E-4 5 23 2 6292
Golgi vesicle transport 1.7977E-4 5 168 3 6292
cellular polysaccharide biosynthetic process 2.4823E-4 5 32 2 6292
polysaccharide biosynthetic process 2.9749E-4 5 35 2 6292
cell wall organization or biogenesis 3.3905E-4 5 208 3 6292
cellular cell wall organization or biogenesis 3.3905E-4 5 208 3 6292
cellular polysaccharide metabolic process 7.3776E-4 5 55 2 6292
cell wall macromolecule catabolic process 7.9466E-4 5 1 1 6292
cell wall chitin catabolic process 7.9466E-4 5 1 1 6292
carbohydrate metabolic process 8.2425E-4 5 281 3 6292
vesicle-mediated transport 1.4416E-3 5 340 3 6292
cellular carbohydrate biosynthetic process 1.481E-3 5 78 2 6292
aminoglycan catabolic process 1.5888E-3 5 2 1 6292
chitin catabolic process 1.5888E-3 5 2 1 6292
carbohydrate biosynthetic process 2.0111E-3 5 91 2 6292
intracellular transport 5.9002E-3 5 553 3 6292
establishment of localization in cell 7.4143E-3 5 599 3 6292
polysaccharide catabolic process 8.7135E-3 5 11 1 6292
cellular localization 9.0715E-3 5 643 3 6292

Molecular Function Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

malic enzyme activity 7.9466E-4 5 1 1 6292
leukotriene-A4 hydrolase activity 7.9466E-4 5 1 1 6292
ether hydrolase activity 1.5888E-3 5 2 1 6292
epoxide hydrolase activity 1.5888E-3 5 2 1 6292
hydrolase activity, acting on ether bonds 2.3825E-3 5 3 1 6292
malate dehydrogenase activity 3.9682E-3 5 5 1 6292
aminopeptidase activity 3.9682E-3 5 5 1 6292
exopeptidase activity 3.9682E-3 5 5 1 6292

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