YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Protein Complex Details

Complex Overview

From Publication: Hazbun TR, et al. (2003) Assigning function to yeast proteins by integration of technologies. Mol Cell 12(6):1353-65
Notes: Complex description from publication: 15. YNL245C (CWC25) mRNA splicing2
Complex Size: 5 proteins

Complex Member Proteins

Cellular Component Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

U5 snRNP 4.5804E-5 5 14 2 6292
ribonucleoprotein complex 2.06E-4 5 514 4 6292
U4/U6 x U5 tri-snRNP complex 2.4823E-4 5 32 2 6292
spliceosomal complex 4.9341E-4 5 45 2 6292
small nuclear ribonucleoprotein complex 9.6778E-4 5 63 2 6292
nuclear part 4.0435E-3 5 1103 4 6292
organelle part 6.2578E-3 5 2282 5 6292
intracellular organelle part 6.2578E-3 5 2282 5 6292

Biological Process Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

nuclear mRNA splicing, via spliceosome 8.7172E-10 5 99 5 6292
RNA splicing, via transesterification reactions with bulged adenosine as nucleophile 9.176E-10 5 100 5 6292
RNA splicing, via transesterification reactions 1.2957E-9 5 107 5 6292
RNA splicing 3.7699E-9 5 132 5 6292
mRNA processing 8.7955E-9 5 156 5 6292
mRNA metabolic process 4.2473E-8 5 213 5 6292
RNA processing 7.8377E-7 5 380 5 6292
ribonucleoprotein complex assembly 2.9624E-5 5 92 3 6292
spliceosome assembly 7.6913E-5 5 18 2 6292
RNA metabolic process 7.942E-5 5 954 5 6292
cellular macromolecular complex assembly 2.281E-4 5 182 3 6292
gene expression 3.5034E-4 5 1283 5 6292
nucleic acid metabolic process 5.7208E-4 5 1415 5 6292
cellular macromolecular complex subunit organization 6.4832E-4 5 259 3 6292
macromolecular complex assembly 8.2425E-4 5 281 3 6292
nucleobase, nucleoside, nucleotide and nucleic acid metabolic process 9.5045E-4 5 1566 5 6292
nuclear mRNA 3'-splice site recognition 1.5888E-3 5 2 1 6292
cis assembly of pre-catalytic spliceosome 1.5888E-3 5 2 1 6292
macromolecular complex subunit organization 1.6626E-3 5 357 3 6292
cellular nitrogen compound metabolic process 1.7545E-3 5 1770 5 6292
nitrogen compound metabolic process 1.8612E-3 5 1791 5 6292
ribonucleoprotein complex biogenesis 1.9042E-3 5 374 3 6292
cellular component assembly 2.072E-3 5 385 3 6292
nuclear mRNA cis splicing, via spliceosome 2.3825E-3 5 3 1 6292
generation of catalytic spliceosome for first transesterification step 2.3825E-3 5 3 1 6292
mRNA splice site selection 4.7604E-3 5 6 1 6292
cellular macromolecule metabolic process 6.2991E-3 5 2285 5 6292
spliceosomal conformational changes to generate catalytic conformation 7.1338E-3 5 9 1 6292
macromolecule metabolic process 7.2329E-3 5 2349 5 6292

Molecular Function Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

U5 snRNA binding 5.0527E-7 5 2 2 6292
snRNA binding 5.0479E-6 5 5 2 6292
RNA binding 1.8021E-3 5 367 3 6292
first spliceosomal transesterification activity 4.7604E-3 5 6 1 6292
binding 7.4489E-3 5 1294 4 6292

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle