| From Publication: | Mewes, H. W. et al. MIPS: Analysis and annotation of proteins from whole genomes. Nucleic Acids Res. 32, D41-D44 |
| Notes: | MIPS hand-curated complex set. MIPS complex ID: 440.10.10 |
| Complex Size: | 5 proteins |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| mRNA cleavage factor complex | 1.8896E-13 | 5 | 20 | 5 | 6292 |
| nucleoplasm part | 8.6048E-8 | 5 | 245 | 5 | 6292 |
| nucleoplasm | 1.2538E-7 | 5 | 264 | 5 | 6292 |
| nuclear lumen | 1.895E-6 | 5 | 453 | 5 | 6292 |
| organelle lumen | 1.2528E-5 | 5 | 660 | 5 | 6292 |
| intracellular organelle lumen | 1.2528E-5 | 5 | 660 | 5 | 6292 |
| membrane-enclosed lumen | 1.6827E-5 | 5 | 700 | 5 | 6292 |
| nuclear part | 1.6432E-4 | 5 | 1103 | 5 | 6292 |
| protein complex | 1.913E-4 | 5 | 1137 | 5 | 6292 |
| macromolecular complex | 1.1794E-3 | 5 | 1635 | 5 | 6292 |
| nucleus | 3.5796E-3 | 5 | 2041 | 5 | 6292 |
| organelle part | 6.2578E-3 | 5 | 2282 | 5 | 6292 |
| intracellular organelle part | 6.2578E-3 | 5 | 2282 | 5 | 6292 |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| mRNA polyadenylation | 1.4172E-13 | 5 | 19 | 5 | 6292 |
| mRNA cleavage | 6.4754E-13 | 5 | 25 | 5 | 6292 |
| RNA polyadenylation | 8.0172E-13 | 5 | 26 | 5 | 6292 |
| mRNA 3'-end processing | 2.0709E-12 | 5 | 31 | 5 | 6292 |
| RNA 3'-end processing | 1.0368E-11 | 5 | 42 | 5 | 6292 |
| nucleic acid phosphodiester bond hydrolysis | 1.6707E-11 | 5 | 46 | 5 | 6292 |
| mRNA processing | 8.7955E-9 | 5 | 156 | 5 | 6292 |
| mRNA metabolic process | 4.2473E-8 | 5 | 213 | 5 | 6292 |
| RNA processing | 7.8377E-7 | 5 | 380 | 5 | 6292 |
| RNA metabolic process | 7.942E-5 | 5 | 954 | 5 | 6292 |
| gene expression | 3.5034E-4 | 5 | 1283 | 5 | 6292 |
| nucleic acid metabolic process | 5.7208E-4 | 5 | 1415 | 5 | 6292 |
| nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | 9.5045E-4 | 5 | 1566 | 5 | 6292 |
| cellular nitrogen compound metabolic process | 1.7545E-3 | 5 | 1770 | 5 | 6292 |
| nitrogen compound metabolic process | 1.8612E-3 | 5 | 1791 | 5 | 6292 |
| cellular macromolecule metabolic process | 6.2991E-3 | 5 | 2285 | 5 | 6292 |
| macromolecule metabolic process | 7.2329E-3 | 5 | 2349 | 5 | 6292 |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| protein heterodimerization activity | 3.0297E-6 | 5 | 4 | 2 | 6292 |
| protein dimerization activity | 7.5694E-6 | 5 | 6 | 2 | 6292 |
| RNA binding | 5.4355E-5 | 5 | 367 | 4 | 6292 |
| binding | 3.6564E-4 | 5 | 1294 | 5 | 6292 |
| nucleic acid binding | 5.7016E-4 | 5 | 666 | 4 | 6292 |
| protein binding | 7.8822E-3 | 5 | 612 | 3 | 6292 |