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View Protein Complex Details

Complex Overview

From Publication: Riffle <i>et al</i>. (2010) (Unpublished Data)
Notes: Complex predicted from the combined set of Gavin (2002), Gavin (2006), Ho (2002) and Krogan (2006); at p-value cutoff of 1E-7
Complex Size: 9 proteins

Complex Member Proteins

Cellular Component Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

organellar small ribosomal subunit 3.1112E-15 9 35 7 6292
mitochondrial small ribosomal subunit 3.1112E-15 9 35 7 6292
small ribosomal subunit 7.4586E-13 9 73 7 6292
organellar ribosome 3.4038E-12 9 90 7 6292
mitochondrial ribosome 3.4038E-12 9 90 7 6292
mitochondrial matrix 4.0895E-10 9 176 7 6292
mitochondrial lumen 4.0895E-10 9 176 7 6292
ribosomal subunit 5.3877E-10 9 183 7 6292
ribosome 1.3691E-8 9 290 7 6292
mitochondrial part 4.2199E-7 9 475 7 6292
ribonucleoprotein complex 7.2713E-7 9 514 7 6292
organelle lumen 4.0406E-6 9 660 7 6292
intracellular organelle lumen 4.0406E-6 9 660 7 6292
membrane-enclosed lumen 6.0367E-6 9 700 7 6292
mitochondrion 7.7547E-6 9 1125 8 6292
non-membrane-bounded organelle 5.0826E-5 9 959 7 6292
intracellular non-membrane-bounded organelle 5.0826E-5 9 959 7 6292
macromolecular complex 1.7084E-3 9 1635 7 6292
cytoplasmic part 3.4066E-3 9 2482 8 6292
membrane-bounded organelle 9.9391E-3 9 3771 9 6292
intracellular membrane-bounded organelle 9.9391E-3 9 3771 9 6292

Biological Process Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

translation 8.3629E-8 9 376 7 6292
gene expression 2.1668E-5 9 1283 8 6292
cellular protein metabolic process 1.0846E-4 9 1074 7 6292
protein metabolic process 1.5759E-4 9 1136 7 6292
cellular macromolecule biosynthetic process 2.1089E-4 9 1187 7 6292
macromolecule biosynthetic process 2.1326E-4 9 1189 7 6292
primary metabolic process 9.2081E-4 9 2896 9 6292
cellular biosynthetic process 1.2993E-3 9 1567 7 6292
cellular metabolic process 1.3966E-3 9 3033 9 6292
snRNA modification 1.4304E-3 9 1 1 6292
biosynthetic process 1.4983E-3 9 1602 7 6292
cellular macromolecule metabolic process 1.8315E-3 9 2285 8 6292
metabolic process 2.004E-3 9 3157 9 6292
macromolecule metabolic process 2.2547E-3 9 2349 8 6292

Molecular Function Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

structural constituent of ribosome 1.5204E-9 9 212 7 6292
structural molecule activity 4.0688E-8 9 339 7 6292
3-hydroxyisobutyryl-CoA hydrolase activity 1.4304E-3 9 1 1 6292
CoA hydrolase activity 4.2857E-3 9 3 1 6292
pseudouridine synthase activity 7.1338E-3 9 5 1 6292

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle