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View Protein Complex Details

Complex Overview

From Publication: Riffle <i>et al</i>. (2010) (Unpublished Data)
Notes: Complex predicted from the combined set of Gavin (2002), Gavin (2006), Ho (2002) and Krogan (2006); at p-value cutoff of 1E-7
Complex Size: 13 proteins

Complex Member Proteins

Cellular Component Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

organellar small ribosomal subunit 2.1267E-24 13 35 11 6292
mitochondrial small ribosomal subunit 2.1267E-24 13 35 11 6292
small ribosomal subunit 1.7937E-20 13 73 11 6292
organellar ribosome 2.0866E-19 13 90 11 6292
mitochondrial ribosome 2.0866E-19 13 90 11 6292
mitochondrial matrix 4.4687E-16 13 176 11 6292
mitochondrial lumen 4.4687E-16 13 176 11 6292
ribosomal subunit 6.9343E-16 13 183 11 6292
ribosome 1.1915E-13 13 290 11 6292
mitochondrial part 2.7624E-11 13 475 11 6292
ribonucleoprotein complex 6.5586E-11 13 514 11 6292
mitochondrion 1.8026E-10 13 1125 13 6292
organelle lumen 1.0033E-9 13 660 11 6292
intracellular organelle lumen 1.0033E-9 13 660 11 6292
membrane-enclosed lumen 1.901E-9 13 700 11 6292
non-membrane-bounded organelle 5.6879E-8 13 959 11 6292
intracellular non-membrane-bounded organelle 5.6879E-8 13 959 11 6292
cytoplasmic part 5.494E-6 13 2482 13 6292
macromolecular complex 1.6165E-5 13 1635 11 6292
organelle part 4.9114E-4 13 2282 11 6292
intracellular organelle part 4.9114E-4 13 2282 11 6292
cytoplasm 5.8578E-4 13 3552 13 6292
membrane-bounded organelle 1.2767E-3 13 3771 13 6292
intracellular membrane-bounded organelle 1.2767E-3 13 3771 13 6292
intracellular organelle 3.4477E-3 13 4070 13 6292
organelle 3.4587E-3 13 4071 13 6292

Biological Process Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

translation 2.1116E-12 13 376 11 6292
cellular protein metabolic process 1.9126E-7 13 1074 11 6292
protein metabolic process 3.4803E-7 13 1136 11 6292
cellular macromolecule biosynthetic process 5.5534E-7 13 1187 11 6292
macromolecule biosynthetic process 5.6537E-7 13 1189 11 6292
gene expression 1.2671E-6 13 1283 11 6292
cellular biosynthetic process 1.038E-5 13 1567 11 6292
biosynthetic process 1.3071E-5 13 1602 11 6292
primary metabolic process 4.1002E-5 13 2896 13 6292
cellular macromolecule metabolic process 4.4721E-5 13 2285 12 6292
macromolecule metabolic process 6.1467E-5 13 2349 12 6292
cellular metabolic process 7.4867E-5 13 3033 13 6292
metabolic process 1.2617E-4 13 3157 13 6292
translational initiation 3.2387E-3 13 42 2 6292

Molecular Function Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

structural constituent of ribosome 3.618E-15 13 212 11 6292
structural molecule activity 6.7238E-13 13 339 11 6292
3-hydroxyisobutyryl-CoA hydrolase activity 2.0661E-3 13 1 1 6292
CoA hydrolase activity 6.1865E-3 13 3 1 6292

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle