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View Protein Complex Details

Complex Overview

From Publication: Riffle <i>et al</i>. (2010) (Unpublished Data)
Notes: Complex predicted from the combined set of Gavin (2002), Gavin (2006), Ho (2002) and Krogan (2006); at p-value cutoff of 1E-7
Complex Size: 2 proteins

Complex Member Proteins

Cellular Component Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

FACT complex 6.3568E-4 2 2 1 6292
nuclear chromosome part 9.0721E-4 2 190 2 6292
nuclear chromosome 1.3075E-3 2 228 2 6292
chromosomal part 1.413E-3 2 237 2 6292
synaptonemal complex 1.5888E-3 2 5 1 6292
chromosome 1.8898E-3 2 274 2 6292
alpha DNA polymerase:primase complex 2.224E-3 2 7 1 6292
nuclear replisome 5.7138E-3 2 18 1 6292
replisome 5.7138E-3 2 18 1 6292
nuclear replication fork 6.3477E-3 2 20 1 6292
transcription elongation factor complex 7.2981E-3 2 23 1 6292

Biological Process Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

chromatin assembly or disassembly 3.0063E-5 2 35 2 6292
DNA-dependent DNA replication 1.678E-4 2 82 2 6292
DNA replication 3.791E-4 2 123 2 6292
chromatin organization 1.036E-3 2 203 2 6292
regulation of mitotic recombination 1.5888E-3 2 5 1 6292
DNA topological change 2.5415E-3 2 8 1 6292
regulation of DNA recombination 4.7627E-3 2 15 1 6292
chromosome organization 7.7677E-3 2 555 2 6292
DNA metabolic process 8.631E-3 2 585 2 6292
regulation of DNA metabolic process 9.8303E-3 2 31 1 6292
DNA strand elongation 9.8303E-3 2 31 1 6292
DNA strand elongation involved in DNA replication 9.8303E-3 2 31 1 6292

Molecular Function Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

DNA topoisomerase (ATP-hydrolyzing) activity 3.1786E-4 2 1 1 6292
DNA topoisomerase activity 1.9064E-3 2 6 1 6292

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle