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View Protein Complex Details

Complex Overview

From Publication: Riffle <i>et al</i>. (2010) (Unpublished Data)
Notes: Complex predicted from the combined set of Gavin (2002), Gavin (2006), Ho (2002) and Krogan (2006); at p-value cutoff of 1E-7
Complex Size: 5 proteins

Complex Member Proteins

Cellular Component Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

COPI coated vesicle membrane 1.5357E-15 5 9 5 6292
COPI vesicle coat 1.5357E-15 5 9 5 6292
Golgi-associated vesicle membrane 5.3237E-14 5 16 5 6292
COPI-coated vesicle 2.4801E-13 5 21 5 6292
vesicle coat 3.3913E-12 5 34 5 6292
coated vesicle membrane 3.9566E-12 5 35 5 6292
cytoplasmic vesicle membrane 3.9566E-12 5 35 5 6292
vesicle membrane 3.9566E-12 5 35 5 6292
membrane coat 6.1176E-12 5 38 5 6292
coated membrane 6.1176E-12 5 38 5 6292
cytoplasmic vesicle part 7.0173E-12 5 39 5 6292
Golgi-associated vesicle 8.0197E-12 5 40 5 6292
Golgi membrane 2.3241E-11 5 49 5 6292
coated vesicle 3.5387E-10 5 83 5 6292
cytoplasmic vesicle 1.2957E-9 5 107 5 6292
membrane-bounded vesicle 1.2957E-9 5 107 5 6292
cytoplasmic membrane-bounded vesicle 1.2957E-9 5 107 5 6292
vesicle 1.4917E-9 5 110 5 6292
Golgi apparatus part 2.226E-9 5 119 5 6292
Golgi apparatus 1.3999E-8 5 171 5 6292
endomembrane system 9.8903E-7 5 398 5 6292
membrane part 1.2719E-5 5 662 5 6292
organelle membrane 1.5885E-5 5 692 5 6292
protein complex 1.913E-4 5 1137 5 6292
membrane 2.4854E-4 5 1198 5 6292
macromolecular complex 1.1794E-3 5 1635 5 6292
ER-Golgi intermediate compartment 1.5888E-3 5 2 1 6292
organelle part 6.2578E-3 5 2282 5 6292
intracellular organelle part 6.2578E-3 5 2282 5 6292
cytoplasmic part 9.5281E-3 5 2482 5 6292

Biological Process Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

ER to Golgi vesicle-mediated transport 3.5387E-10 5 83 5 6292
retrograde vesicle-mediated transport, Golgi to ER 1.1425E-9 5 26 4 6292
Golgi vesicle transport 1.28E-8 5 168 5 6292
vesicle-mediated transport 4.4803E-7 5 340 5 6292
intracellular transport 5.1582E-6 5 553 5 6292
establishment of localization in cell 7.7022E-6 5 599 5 6292
cellular localization 1.0991E-5 5 643 5 6292
transport 9.9051E-5 5 997 5 6292
establishment of localization 1.0465E-4 5 1008 5 6292
localization 1.3464E-4 5 1060 5 6292
Golgi transport vesicle coating 7.9466E-4 5 1 1 6292
COPI coating of Golgi vesicle 7.9466E-4 5 1 1 6292
vesicle targeting, to, from or within Golgi 7.9466E-4 5 1 1 6292
Golgi vesicle budding 7.9466E-4 5 1 1 6292
establishment of vesicle localization 1.5888E-3 5 2 1 6292
vesicle targeting 1.5888E-3 5 2 1 6292
vesicle localization 3.1756E-3 5 4 1 6292
vesicle coating 3.1756E-3 5 4 1 6292
membrane budding 3.9682E-3 5 5 1 6292

Molecular Function Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

ARF GTPase activator activity 3.1756E-3 5 4 1 6292

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle