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View Protein Complex Details

Complex Overview

From Publication: Riffle <i>et al</i>. (2010) (Unpublished Data)
Notes: Complex predicted from the combined set of Gavin (2002), Gavin (2006), Ho (2002) and Krogan (2006); at p-value cutoff of 1E-7
Complex Size: 7 proteins

Complex Member Proteins

Cellular Component Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

COPI coated vesicle membrane 4.663E-22 7 9 7 6292
COPI vesicle coat 4.663E-22 7 9 7 6292
Golgi-associated vesicle membrane 1.4818E-19 7 16 7 6292
COPI-coated vesicle 1.5061E-18 7 21 7 6292
vesicle coat 6.968E-17 7 34 7 6292
coated vesicle membrane 8.7101E-17 7 35 7 6292
cytoplasmic vesicle membrane 8.7101E-17 7 35 7 6292
vesicle membrane 8.7101E-17 7 35 7 6292
membrane coat 1.6347E-16 7 38 7 6292
coated membrane 1.6347E-16 7 38 7 6292
cytoplasmic vesicle part 1.9922E-16 7 39 7 6292
Golgi-associated vesicle 2.4148E-16 7 40 7 6292
Golgi membrane 1.1126E-15 7 49 7 6292
coated vesicle 5.3778E-14 7 83 7 6292
cytoplasmic vesicle 3.3775E-13 7 107 7 6292
membrane-bounded vesicle 3.3775E-13 7 107 7 6292
cytoplasmic membrane-bounded vesicle 3.3775E-13 7 107 7 6292
vesicle 4.1218E-13 7 110 7 6292
Golgi apparatus part 7.2558E-13 7 119 7 6292
Golgi apparatus 9.7024E-12 7 171 7 6292
endomembrane system 3.8554E-9 7 398 7 6292
membrane part 1.3871E-7 7 662 7 6292
organelle membrane 1.8943E-7 7 692 7 6292
protein complex 6.1975E-6 7 1137 7 6292
membrane 8.9433E-6 7 1198 7 6292
macromolecular complex 7.9244E-5 7 1635 7 6292
organelle part 8.2061E-4 7 2282 7 6292
intracellular organelle part 8.2061E-4 7 2282 7 6292
cytoplasmic part 1.4786E-3 7 2482 7 6292
endosome 4.4166E-3 7 94 2 6292

Biological Process Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

Golgi vesicle transport 8.5525E-12 7 168 7 6292
retrograde vesicle-mediated transport, Golgi to ER 1.6742E-11 7 26 5 6292
ER to Golgi vesicle-mediated transport 3.0409E-11 7 83 6 6292
vesicle-mediated transport 1.2685E-9 7 340 7 6292
intracellular transport 3.9124E-8 7 553 7 6292
establishment of localization in cell 6.8649E-8 7 599 7 6292
cellular localization 1.1302E-7 7 643 7 6292
transport 2.4639E-6 7 997 7 6292
establishment of localization 2.6612E-6 7 1008 7 6292
localization 3.7883E-6 7 1060 7 6292
vesicle coating 4.4437E-3 7 4 1 6292
membrane budding 5.552E-3 7 5 1 6292

Molecular Function Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle