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View Protein Complex Details

Complex Overview

From Publication: Riffle <i>et al</i>. (2010) (Unpublished Data)
Notes: Complex predicted from the combined set of Gavin (2002), Gavin (2006), Ho (2002) and Krogan (2006); at p-value cutoff of 1E-7
Complex Size: 3 proteins

Complex Member Proteins

Cellular Component Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

gamma-tubulin complex 2.4099E-11 3 3 3 6292
gamma-tubulin small complex, spindle pole body 2.4099E-11 3 3 3 6292
gamma-tubulin small complex 2.4099E-11 3 3 3 6292
inner plaque of spindle pole body 9.6394E-11 3 4 3 6292
outer plaque of spindle pole body 4.8197E-10 3 6 3 6292
microtubule organizing center part 1.3495E-8 3 16 3 6292
microtubule organizing center 9.5698E-7 3 63 3 6292
spindle pole body 9.5698E-7 3 63 3 6292
spindle pole 1.2077E-6 3 68 3 6292
spindle 2.7367E-6 3 89 3 6292
microtubule cytoskeleton 4.6491E-6 3 106 3 6292
cytoskeletal part 3.2131E-5 3 201 3 6292
cytoskeleton 3.9916E-5 3 216 3 6292
non-membrane-bounded organelle 3.5313E-3 3 959 3 6292
intracellular non-membrane-bounded organelle 3.5313E-3 3 959 3 6292
protein complex 5.8881E-3 3 1137 3 6292

Biological Process Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

microtubule nucleation 4.2679E-8 3 23 3 6292
microtubule cytoskeleton organization 3.5531E-6 3 97 3 6292
microtubule-based process 5.3454E-6 3 111 3 6292
cytoskeleton organization 4.8867E-5 3 231 3 6292
mitotic spindle organization in nucleus 4.9138E-5 3 26 2 6292
mitotic spindle organization 1.7015E-4 3 48 2 6292
spindle organization 1.7737E-4 3 49 2 6292
mitotic cell cycle 4.7773E-3 3 255 2 6292
organelle organization 5.734E-3 3 1127 3 6292
M phase 6.3267E-3 3 294 2 6292

Molecular Function Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

structural constituent of cytoskeleton 5.6453E-7 3 53 3 6292
structural molecule activity 1.5509E-4 3 339 3 6292

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle