YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Protein Complex Details

Complex Overview

From Publication: Riffle <i>et al</i>. (2010) (Unpublished Data)
Notes: Complex predicted from the combined set of Gavin (2002), Gavin (2006), Ho (2002) and Krogan (2006); at p-value cutoff of 1E-7
Complex Size: 11 proteins

Complex Member Proteins

Cellular Component Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

organellar small ribosomal subunit 2.7457E-26 11 35 11 6292
mitochondrial small ribosomal subunit 2.7457E-26 11 35 11 6292
small ribosomal subunit 2.3418E-22 11 73 11 6292
organellar ribosome 2.7379E-21 11 90 11 6292
mitochondrial ribosome 2.7379E-21 11 90 11 6292
mitochondrial matrix 6.0154E-18 11 176 11 6292
mitochondrial lumen 6.0154E-18 11 176 11 6292
ribosomal subunit 9.3538E-18 11 183 11 6292
ribosome 1.6601E-15 11 290 11 6292
mitochondrial part 4.0747E-13 11 475 11 6292
ribonucleoprotein complex 9.7932E-13 11 514 11 6292
organelle lumen 1.5694E-11 11 660 11 6292
intracellular organelle lumen 1.5694E-11 11 660 11 6292
membrane-enclosed lumen 3.0124E-11 11 700 11 6292
non-membrane-bounded organelle 9.8204E-10 11 959 11 6292
intracellular non-membrane-bounded organelle 9.8204E-10 11 959 11 6292
mitochondrion 5.7346E-9 11 1125 11 6292
macromolecular complex 3.5578E-7 11 1635 11 6292
organelle part 1.4064E-5 11 2282 11 6292
intracellular organelle part 1.4064E-5 11 2282 11 6292
cytoplasmic part 3.5506E-5 11 2482 11 6292
cytoplasm 1.8433E-3 11 3552 11 6292
membrane-bounded organelle 3.5629E-3 11 3771 11 6292
intracellular membrane-bounded organelle 3.5629E-3 11 3771 11 6292
intracellular organelle 8.2563E-3 11 4070 11 6292
organelle 8.2787E-3 11 4071 11 6292

Biological Process Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

translation 3.0204E-14 11 376 11 6292
cellular protein metabolic process 3.4344E-9 11 1074 11 6292
protein metabolic process 6.3855E-9 11 1136 11 6292
cellular macromolecule biosynthetic process 1.0373E-8 11 1187 11 6292
macromolecule biosynthetic process 1.0568E-8 11 1189 11 6292
gene expression 2.4488E-8 11 1283 11 6292
cellular biosynthetic process 2.2264E-7 11 1567 11 6292
biosynthetic process 2.841E-7 11 1602 11 6292
cellular macromolecule metabolic process 1.4269E-5 11 2285 11 6292
macromolecule metabolic process 1.9349E-5 11 2349 11 6292
primary metabolic process 1.9438E-4 11 2896 11 6292
cellular metabolic process 3.2347E-4 11 3033 11 6292
metabolic process 5.03E-4 11 3157 11 6292

Molecular Function Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

structural constituent of ribosome 4.9231E-17 11 212 11 6292
structural molecule activity 9.5087E-15 11 339 11 6292
tRNA binding 8.7135E-3 11 5 1 6292

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle