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View Protein Complex Details

Complex Overview

From Publication: Riffle <i>et al</i>. (2010) (Unpublished Data)
Notes: Complex predicted from the combined set of Gavin (2002), Gavin (2006), Ho (2002) and Krogan (2006); at p-value cutoff of 1E-7
Complex Size: 22 proteins

Complex Member Proteins

Protein

GO Cellular Component GO Biological Process GO Molecular Function
MRP1
  • mitochondrion
  • mitochondrial small ribosomal subunit
  • translation
  • structural constituent of ribosome
  • MRP13
  • mitochondrion
  • mitochondrial small ribosomal subunit
  • translation
  • structural constituent of ribosome
  • MRP21
  • mitochondrion
  • mitochondrial small ribosomal subunit
  • translational initiation
  • translation
  • structural constituent of ribosome
  • MRP4
  • mitochondrion
  • mitochondrial small ribosomal subunit
  • translation
  • structural constituent of ribosome
  • tRNA binding
  • MRP51
  • mitochondrion
  • mitochondrial small ribosomal subunit
  • translational initiation
  • translation
  • structural constituent of ribosome
  • MRPS17
  • mitochondrion
  • mitochondrial small ribosomal subunit
  • aerobic respiration
  • translation
  • structural constituent of ribosome
  • MRPS18
  • mitochondrion
  • mitochondrial small ribosomal subunit
  • translation
  • structural constituent of ribosome
  • MRPS28
  • mitochondrion
  • mitochondrial small ribosomal subunit
  • ribosomal small subunit assembly
  • translation
  • RNA binding
  • structural constituent of ribosome
  • MRPS5
  • mitochondrion
  • mitochondrial small ribosomal subunit
  • translation
  • structural constituent of ribosome
  • MRPS8
  • mitochondrion
  • mitochondrial small ribosomal subunit
  • translation
  • structural constituent of ribosome
  • MRPS9
  • mitochondrion
  • mitochondrial small ribosomal subunit
  • translation
  • structural constituent of ribosome
  • NAM9
  • mitochondrion
  • mitochondrial small ribosomal subunit
  • translation
  • structural constituent of ribosome
  • PET123
  • mitochondrion
  • mitochondrial small ribosomal subunit
  • translation
  • structural constituent of ribosome
  • RSM10
  • mitochondrion
  • mitochondrial small ribosomal subunit
  • translation
  • structural constituent of ribosome
  • RSM19
  • mitochondrion
  • mitochondrial small ribosomal subunit
  • translation
  • structural constituent of ribosome
  • RSM22
  • mitochondrion
  • mitochondrial small ribosomal subunit
  • translation
  • structural constituent of ribosome
  • RSM23
  • mitochondrion
  • mitochondrial small ribosomal subunit
  • response to drug
  • translation
  • structural constituent of ribosome
  • RSM24
  • mitochondrion
  • mitochondrial small ribosomal subunit
  • aerobic respiration
  • translation
  • structural constituent of ribosome
  • RSM25
  • mitochondrion
  • mitochondrial small ribosomal subunit
  • translation
  • structural constituent of ribosome
  • RSM26
  • mitochondrion
  • mitochondrial small ribosomal subunit
  • translation
  • structural constituent of ribosome
  • RSM27
  • mitochondrion
  • mitochondrial small ribosomal subunit
  • translation
  • structural constituent of ribosome
  • RSM7
  • mitochondrion
  • mitochondrial small ribosomal subunit
  • translation
  • structural constituent of ribosome
  • Cellular Component Analysis

    Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

    Only showing terms with a p-value less than or equal to 0.01.

    GO Term

    P-value

    A

    B

    I

    T

    organellar small ribosomal subunit 4.5979E-54 22 35 22 6292
    mitochondrial small ribosomal subunit 4.5979E-54 22 35 22 6292
    small ribosomal subunit 7.9852E-45 22 73 22 6292
    organellar ribosome 1.6599E-42 22 90 22 6292
    mitochondrial ribosome 1.6599E-42 22 90 22 6292
    mitochondrial matrix 1.7748E-35 22 176 22 6292
    mitochondrial lumen 1.7748E-35 22 176 22 6292
    ribosomal subunit 4.4208E-35 22 183 22 6292
    ribosome 1.822E-30 22 290 22 6292
    mitochondrial part 1.3044E-25 22 475 22 6292
    ribonucleoprotein complex 7.6885E-25 22 514 22 6292
    organelle lumen 2.084E-22 22 660 22 6292
    intracellular organelle lumen 2.084E-22 22 660 22 6292
    membrane-enclosed lumen 7.7618E-22 22 700 22 6292
    non-membrane-bounded organelle 8.654E-19 22 959 22 6292
    intracellular non-membrane-bounded organelle 8.654E-19 22 959 22 6292
    mitochondrion 3.0076E-17 22 1125 22 6292
    macromolecular complex 1.1978E-13 22 1635 22 6292
    organelle part 1.9119E-10 22 2282 22 6292
    intracellular organelle part 1.9119E-10 22 2282 22 6292
    cytoplasmic part 1.2238E-9 22 2482 22 6292
    cytoplasm 3.3475E-6 22 3552 22 6292
    membrane-bounded organelle 1.2531E-5 22 3771 22 6292
    intracellular membrane-bounded organelle 1.2531E-5 22 3771 22 6292
    intracellular organelle 6.7452E-5 22 4070 22 6292
    organelle 6.7819E-5 22 4071 22 6292
    intracellular part 4.7906E-3 22 4938 22 6292
    intracellular 5.6476E-3 22 4975 22 6292

    Biological Process Analysis

    Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

    Only showing terms with a p-value less than or equal to 0.01.

    GO Term

    P-value

    A

    B

    I

    T

    translation 6.6787E-28 22 376 22 6292
    cellular protein metabolic process 1.0732E-17 22 1074 22 6292
    protein metabolic process 3.733E-17 22 1136 22 6292
    cellular macromolecule biosynthetic process 9.8968E-17 22 1187 22 6292
    macromolecule biosynthetic process 1.0274E-16 22 1189 22 6292
    gene expression 5.5586E-16 22 1283 22 6292
    cellular biosynthetic process 4.6753E-14 22 1567 22 6292
    biosynthetic process 7.6257E-14 22 1602 22 6292
    cellular macromolecule metabolic process 1.9682E-10 22 2285 22 6292
    macromolecule metabolic process 3.6241E-10 22 2349 22 6292
    primary metabolic process 3.6936E-8 22 2896 22 6292
    cellular metabolic process 1.0248E-7 22 3033 22 6292
    metabolic process 2.482E-7 22 3157 22 6292
    cellular process 4.2871E-4 22 4426 22 6292
    translational initiation 9.2338E-3 22 42 2 6292

    Molecular Function Analysis

    Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

    Only showing terms with a p-value less than or equal to 0.01.

    GO Term

    P-value

    A

    B

    I

    T

    structural constituent of ribosome 1.3549E-33 22 212 22 6292
    structural molecule activity 6.3769E-29 22 339 22 6292

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle