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View Protein Complex Details

Complex Overview

From Publication: Riffle <i>et al</i>. (2010) (Unpublished Data)
Notes: Complex predicted from the combined set of Gavin (2002), Gavin (2006), Ho (2002) and Krogan (2006); at p-value cutoff of 1E-7
Complex Size: 12 proteins

Complex Member Proteins

Cellular Component Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

organellar small ribosomal subunit 1.0491E-28 12 35 12 6292
mitochondrial small ribosomal subunit 1.0491E-28 12 35 12 6292
small ribosomal subunit 2.3116E-24 12 73 12 6292
organellar ribosome 3.4436E-23 12 90 12 6292
mitochondrial ribosome 3.4436E-23 12 90 12 6292
mitochondrial matrix 1.5802E-19 12 176 12 6292
mitochondrial lumen 1.5802E-19 12 176 12 6292
ribosomal subunit 2.5615E-19 12 183 12 6292
ribosome 7.3739E-17 12 290 12 6292
mitochondrial part 3.0101E-14 12 475 12 6292
ribonucleoprotein complex 7.8427E-14 12 514 12 6292
organelle lumen 1.6216E-12 12 660 12 6292
intracellular organelle lumen 1.6216E-12 12 660 12 6292
membrane-enclosed lumen 3.3044E-12 12 700 12 6292
non-membrane-bounded organelle 1.4822E-10 12 959 12 6292
intracellular non-membrane-bounded organelle 1.4822E-10 12 959 12 6292
mitochondrion 1.0171E-9 12 1125 12 6292
macromolecular complex 9.1989E-8 12 1635 12 6292
organelle part 5.0851E-6 12 2282 12 6292
intracellular organelle part 5.0851E-6 12 2282 12 6292
cytoplasmic part 1.3968E-5 12 2482 12 6292
cytoplasm 1.0392E-3 12 3552 12 6292
membrane-bounded organelle 2.1329E-3 12 3771 12 6292
intracellular membrane-bounded organelle 2.1329E-3 12 3771 12 6292
intracellular organelle 5.3355E-3 12 4070 12 6292
organelle 5.3513E-3 12 4071 12 6292

Biological Process Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

translation 1.7552E-15 12 376 12 6292
cellular protein metabolic process 5.8125E-10 12 1074 12 6292
protein metabolic process 1.1437E-9 12 1136 12 6292
cellular macromolecule biosynthetic process 1.9421E-9 12 1187 12 6292
macromolecule biosynthetic process 1.9819E-9 12 1189 12 6292
gene expression 4.9591E-9 12 1283 12 6292
cellular biosynthetic process 5.5155E-8 12 1567 12 6292
biosynthetic process 7.1963E-8 12 1602 12 6292
cellular macromolecule metabolic process 5.1661E-6 12 2285 12 6292
macromolecule metabolic process 7.2022E-6 12 2349 12 6292
primary metabolic process 8.9282E-5 12 2896 12 6292
cellular metabolic process 1.5563E-4 12 3033 12 6292
metabolic process 2.5194E-4 12 3157 12 6292
translational initiation 2.752E-3 12 42 2 6292

Molecular Function Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

structural constituent of ribosome 1.5755E-18 12 212 12 6292
structural molecule activity 4.9655E-16 12 339 12 6292

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle