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View Protein Complex Details

Complex Overview

From Publication: Riffle <i>et al</i>. (2010) (Unpublished Data)
Notes: Complex predicted from the combined set of Gavin (2002), Gavin (2006), Ho (2002) and Krogan (2006); at p-value cutoff of 1E-7
Complex Size: 4 proteins

Complex Member Proteins

Cellular Component Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

nuclear cap binding complex 1.9063E-3 4 3 1 6292
ribonucleoprotein complex 2.0368E-3 4 514 3 6292
eukaryotic translation initiation factor 4F complex 2.5411E-3 4 4 1 6292
RNA cap binding complex 3.8098E-3 4 6 1 6292
commitment complex 7.6087E-3 4 12 1 6292
U2-type spliceosomal complex 7.6087E-3 4 12 1 6292
cytoplasmic mRNA processing body 9.5041E-3 4 15 1 6292

Biological Process Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

mRNA catabolic process 7.0115E-4 4 69 2 6292
RNA catabolic process 9.4222E-4 4 80 2 6292
filamentous growth 1.6501E-3 4 106 2 6292
regulation of biological quality 2.4982E-3 4 551 3 6292
growth 3.0699E-3 4 145 2 6292
traversing start control point of mitotic cell cycle 3.8098E-3 4 6 1 6292
response to exogenous dsRNA 4.4437E-3 4 7 1 6292
response to dsRNA 4.4437E-3 4 7 1 6292
mRNA metabolic process 6.5424E-3 4 213 2 6292
nuclear-transcribed mRNA catabolic process, nonsense-mediated decay 6.9763E-3 4 11 1 6292

Molecular Function Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

mRNA binding 1.7912E-4 4 35 2 6292
5'-3' exoribonuclease activity 1.2712E-3 4 2 1 6292
recombinase activity 2.5411E-3 4 4 1 6292
poly-purine tract binding 3.1756E-3 4 5 1 6292
poly(A) RNA binding 3.1756E-3 4 5 1 6292
single-stranded RNA binding 3.1756E-3 4 5 1 6292
5'-3' exonuclease activity 3.8098E-3 4 6 1 6292
nucleic acid binding 4.351E-3 4 666 3 6292

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle