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View Protein Complex Details

Complex Overview

From Publication: Riffle <i>et al</i>. (2010) (Unpublished Data)
Notes: Complex predicted from the combined set of Gavin (2002), Gavin (2006), Ho (2002) and Krogan (2006); at p-value cutoff of 1E-7
Complex Size: 4 proteins

Complex Member Proteins

Cellular Component Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

nucleolus 1.2302E-6 4 211 4 6292
nuclear lumen 2.6539E-5 4 453 4 6292
organelle lumen 1.2008E-4 4 660 4 6292
intracellular organelle lumen 1.2008E-4 4 660 4 6292
membrane-enclosed lumen 1.5203E-4 4 700 4 6292
non-membrane-bounded organelle 5.368E-4 4 959 4 6292
intracellular non-membrane-bounded organelle 5.368E-4 4 959 4 6292
nuclear part 9.4015E-4 4 1103 4 6292
nuclear outer membrane 1.0884E-3 4 86 2 6292
nuclear membrane 1.3833E-3 4 97 2 6292
outer membrane 4.5994E-3 4 178 2 6292
organelle outer membrane 4.5994E-3 4 178 2 6292
nuclear envelope 5.7261E-3 4 199 2 6292
nuclear membrane-endoplasmic reticulum network 7.7328E-3 4 232 2 6292

Biological Process Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

ribosomal large subunit biogenesis 4.1794E-6 4 65 3 6292
ribosome biogenesis 8.9951E-6 4 346 4 6292
ribonucleoprotein complex biogenesis 1.2296E-5 4 374 4 6292
cellular component biogenesis 1.4687E-4 4 694 4 6292
ribosomal large subunit assembly 2.4654E-4 4 41 2 6292
ribosomal subunit assembly 4.4515E-4 4 55 2 6292
ribosome assembly 6.0317E-4 4 64 2 6292
organelle assembly 7.0115E-4 4 69 2 6292
ribonucleoprotein complex assembly 1.2449E-3 4 92 2 6292
regulation of transcription, mating-type specific 3.1756E-3 4 5 1 6292
cellular macromolecular complex assembly 4.8049E-3 4 182 2 6292
cellular macromolecular complex subunit organization 9.5855E-3 4 259 2 6292

Molecular Function Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

ribosomal large subunit binding 6.3573E-4 4 1 1 6292
ribonucleoprotein binding 4.4437E-3 4 7 1 6292
specific transcriptional repressor activity 9.5041E-3 4 15 1 6292

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle