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View Protein Complex Details

Complex Overview

From Publication: Riffle <i>et al</i>. (2010) (Unpublished Data)
Notes: Complex predicted from the combined set of Gavin (2002), Gavin (2006), Ho (2002) and Krogan (2006); at p-value cutoff of 1E-7
Complex Size: 4 proteins

Complex Member Proteins

Cellular Component Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

cytosolic large ribosomal subunit 5.3002E-4 4 60 2 6292
non-membrane-bounded organelle 5.368E-4 4 959 4 6292
intracellular non-membrane-bounded organelle 5.368E-4 4 959 4 6292
Noc2p-Noc3p complex 1.2712E-3 4 2 1 6292
Noc1p-Noc2p complex 1.2712E-3 4 2 1 6292
cytosolic ribosome 1.499E-3 4 101 2 6292
large ribosomal subunit 1.7761E-3 4 110 2 6292
ribonucleoprotein complex 2.0368E-3 4 514 3 6292
cytosolic part 2.1811E-3 4 122 2 6292
Noc complex 3.1756E-3 4 5 1 6292
ribosomal subunit 4.8569E-3 4 183 2 6292
preribosome, large subunit precursor 5.7106E-3 4 9 1 6292
nucleolus 6.4227E-3 4 211 2 6292

Biological Process Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

ribosome assembly 3.987E-6 4 64 3 6292
organelle assembly 5.0107E-6 4 69 3 6292
ribonucleoprotein complex assembly 1.1977E-5 4 92 3 6292
cellular macromolecular complex assembly 9.3229E-5 4 182 3 6292
ribosomal large subunit assembly 2.4654E-4 4 41 2 6292
cellular macromolecular complex subunit organization 2.6748E-4 4 259 3 6292
macromolecular complex assembly 3.4098E-4 4 281 3 6292
ribosomal subunit assembly 4.4515E-4 4 55 2 6292
ribosomal large subunit biogenesis 6.2218E-4 4 65 2 6292
ribosome biogenesis 6.3273E-4 4 346 3 6292
macromolecular complex subunit organization 6.9425E-4 4 357 3 6292
ribonucleoprotein complex biogenesis 7.9684E-4 4 374 3 6292
cellular component assembly 8.6824E-4 4 385 3 6292
cellular component biogenesis 4.9063E-3 4 694 3 6292

Molecular Function Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

RNA binding 7.5347E-4 4 367 3 6292
5S rRNA binding 1.2712E-3 4 2 1 6292
rRNA primary transcript binding 3.1756E-3 4 5 1 6292
nucleic acid binding 4.351E-3 4 666 3 6292
structural constituent of ribosome 6.4824E-3 4 212 2 6292

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle