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View Protein Complex Details

Complex Overview

From Publication: Riffle <i>et al</i>. (2010) (Unpublished Data)
Notes: Complex predicted from the combined set of Gavin (2002), Gavin (2006), Ho (2002) and Krogan (2006); at p-value cutoff of 1E-7
Complex Size: 4 proteins

Complex Member Proteins

Cellular Component Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

Noc1p-Noc2p complex 3.0316E-7 4 2 2 6292
Noc complex 3.0297E-6 4 5 2 6292
preribosome, large subunit precursor 1.0898E-5 4 9 2 6292
90S preribosome 4.1099E-5 4 17 2 6292
nucleolus 1.4509E-4 4 211 3 6292
preribosome 1.6892E-4 4 34 2 6292
nucleolar part 2.974E-4 4 45 2 6292
Noc2p-Noc3p complex 1.2712E-3 4 2 1 6292
nuclear lumen 1.404E-3 4 453 3 6292
ribonucleoprotein complex 2.0368E-3 4 514 3 6292
organelle lumen 4.2376E-3 4 660 3 6292
intracellular organelle lumen 4.2376E-3 4 660 3 6292
membrane-enclosed lumen 5.0309E-3 4 700 3 6292

Biological Process Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

cellular component biogenesis 1.4687E-4 4 694 4 6292
macromolecular complex assembly 3.4098E-4 4 281 3 6292
ribosome assembly 6.0317E-4 4 64 2 6292
ribosome biogenesis 6.3273E-4 4 346 3 6292
macromolecular complex subunit organization 6.9425E-4 4 357 3 6292
organelle assembly 7.0115E-4 4 69 2 6292
ribonucleoprotein complex biogenesis 7.9684E-4 4 374 3 6292
cellular component assembly 8.6824E-4 4 385 3 6292
ribonucleoprotein complex assembly 1.2449E-3 4 92 2 6292
cellular macromolecular complex assembly 4.8049E-3 4 182 2 6292
cellular macromolecular complex subunit organization 9.5855E-3 4 259 2 6292

Molecular Function Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

rRNA primary transcript binding 3.1756E-3 4 5 1 6292

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle