| From Publication: | Riffle <i>et al</i>. (2010) (Unpublished Data) |
| Notes: | Complex predicted from the combined set of Gavin (2002), Gavin (2006), Ho (2002) and Krogan (2006); at p-value cutoff of 1E-7 |
| Complex Size: | 12 proteins |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| RSC complex | 1.3246E-28 | 12 | 20 | 11 | 6292 |
| chromatin remodeling complex | 9.8263E-20 | 12 | 99 | 11 | 6292 |
| nuclear part | 8.0153E-10 | 12 | 1103 | 12 | 6292 |
| protein complex | 6.4659E-8 | 12 | 1137 | 11 | 6292 |
| nucleus | 1.3278E-6 | 12 | 2041 | 12 | 6292 |
| SWI/SNF-type complex | 1.5001E-6 | 12 | 13 | 3 | 6292 |
| SWI/SNF complex | 1.5001E-6 | 12 | 13 | 3 | 6292 |
| macromolecular complex | 3.2574E-6 | 12 | 1635 | 11 | 6292 |
| organelle part | 5.0851E-6 | 12 | 2282 | 12 | 6292 |
| intracellular organelle part | 5.0851E-6 | 12 | 2282 | 12 | 6292 |
| membrane-bounded organelle | 2.1329E-3 | 12 | 3771 | 12 | 6292 |
| intracellular membrane-bounded organelle | 2.1329E-3 | 12 | 3771 | 12 | 6292 |
| intracellular organelle | 5.3355E-3 | 12 | 4070 | 12 | 6292 |
| organelle | 5.3513E-3 | 12 | 4071 | 12 | 6292 |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| chromatin remodeling | 1.2006E-21 | 12 | 68 | 11 | 6292 |
| ATP-dependent chromatin remodeling | 1.2621E-17 | 12 | 26 | 8 | 6292 |
| chromatin modification | 4.163E-17 | 12 | 168 | 11 | 6292 |
| chromatin organization | 3.521E-16 | 12 | 203 | 11 | 6292 |
| chromosome organization | 1.9889E-13 | 12 | 555 | 12 | 6292 |
| organelle organization | 1.0391E-9 | 12 | 1127 | 12 | 6292 |
| cellular component organization | 6.186E-8 | 12 | 1582 | 12 | 6292 |
| chromatin remodeling at centromere | 3.3348E-6 | 12 | 2 | 2 | 6292 |
| response to DNA damage stimulus | 4.5415E-5 | 12 | 236 | 5 | 6292 |
| chromosome segregation | 7.1288E-5 | 12 | 128 | 4 | 6292 |
| cellular response to stress | 1.2181E-4 | 12 | 290 | 5 | 6292 |
| double-strand break repair | 1.4638E-4 | 12 | 57 | 3 | 6292 |
| DNA metabolic process | 3.5676E-4 | 12 | 585 | 6 | 6292 |
| cellular response to stimulus | 4.2979E-4 | 12 | 379 | 5 | 6292 |
| response to stress | 1.4952E-3 | 12 | 497 | 5 | 6292 |
| DNA repair | 5.0207E-3 | 12 | 192 | 3 | 6292 |
| rRNA transcription | 5.7116E-3 | 12 | 3 | 1 | 6292 |
| nucleic acid metabolic process | 7.7238E-3 | 12 | 1415 | 7 | 6292 |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| DNA-dependent ATPase activity | 9.6751E-15 | 12 | 55 | 8 | 6292 |
| ATPase activity, coupled | 3.7472E-11 | 12 | 149 | 8 | 6292 |
| ATPase activity | 6.1882E-10 | 12 | 211 | 8 | 6292 |
| nucleoside-triphosphatase activity | 2.1178E-8 | 12 | 329 | 8 | 6292 |
| hydrolase activity, acting on acid anhydrides | 3.6888E-8 | 12 | 353 | 8 | 6292 |
| hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides | 3.6888E-8 | 12 | 353 | 8 | 6292 |
| pyrophosphatase activity | 3.6888E-8 | 12 | 353 | 8 | 6292 |
| hydrolase activity | 5.3982E-5 | 12 | 911 | 8 | 6292 |
| chromatin binding | 1.7038E-3 | 12 | 33 | 2 | 6292 |
| catalytic activity | 4.6325E-3 | 12 | 2150 | 9 | 6292 |
| general RNA polymerase II transcription factor activity | 6.2953E-3 | 12 | 64 | 2 | 6292 |
| SUMO ligase activity | 9.5026E-3 | 12 | 5 | 1 | 6292 |