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View Protein Complex Details

Complex Overview

From Publication: Riffle <i>et al</i>. (2010) (Unpublished Data)
Notes: Complex predicted from the combined set of Gavin (2002), Gavin (2006), Ho (2002) and Krogan (2006); at p-value cutoff of 1E-7
Complex Size: 4 proteins

Complex Member Proteins

Cellular Component Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

cytosolic large ribosomal subunit 3.2762E-6 4 60 3 6292
cytosolic ribosome 1.5876E-5 4 101 3 6292
large ribosomal subunit 2.0538E-5 4 110 3 6292
cytosolic part 2.8056E-5 4 122 3 6292
ribosomal subunit 9.4772E-5 4 183 3 6292
cytosol 3.5193E-4 4 284 3 6292
ribosome 3.7451E-4 4 290 3 6292
non-membrane-bounded organelle 5.368E-4 4 959 4 6292
intracellular non-membrane-bounded organelle 5.368E-4 4 959 4 6292
ribonucleoprotein complex 2.0368E-3 4 514 3 6292

Biological Process Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

regulation of translation 4.7822E-4 4 57 2 6292
posttranscriptional regulation of gene expression 5.4787E-4 4 61 2 6292
regulation of cellular protein metabolic process 6.8098E-4 4 68 2 6292
regulation of protein metabolic process 8.0639E-4 4 74 2 6292
translation 8.0953E-4 4 376 3 6292
cellular macromolecule biosynthetic process 1.2614E-3 4 1187 4 6292
macromolecule biosynthetic process 1.27E-3 4 1189 4 6292
regulation of gene expression 1.3321E-3 4 445 3 6292
regulation of macromolecule biosynthetic process 1.4316E-3 4 456 3 6292
regulation of cellular biosynthetic process 1.5848E-3 4 472 3 6292
regulation of biosynthetic process 1.5947E-3 4 473 3 6292
gene expression 1.7224E-3 4 1283 4 6292
regulation of macromolecule metabolic process 1.7483E-3 4 488 3 6292
regulation of primary metabolic process 2.0368E-3 4 514 3 6292
regulation of cellular metabolic process 2.3038E-3 4 536 3 6292
regulation of metabolic process 2.4454E-3 4 547 3 6292
regulation of transcription, mating-type specific 3.1756E-3 4 5 1 6292
cellular biosynthetic process 3.8359E-3 4 1567 4 6292
biosynthetic process 4.1907E-3 4 1602 4 6292
regulation of cellular process 7.309E-3 4 796 3 6292
regulation of biological process 8.0789E-3 4 824 3 6292

Molecular Function Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

RNA binding 1.1397E-5 4 367 4 6292
nucleic acid binding 1.2452E-4 4 666 4 6292
structural constituent of ribosome 1.4716E-4 4 212 3 6292
structural molecule activity 5.9551E-4 4 339 3 6292
binding 1.7823E-3 4 1294 4 6292
specific transcriptional repressor activity 9.5041E-3 4 15 1 6292

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle