From Publication: | Riffle <i>et al</i>. (2010) (Unpublished Data) |
Notes: | Complex predicted from the combined set of Gavin (2002), Gavin (2006), Ho (2002) and Krogan (2006); at p-value cutoff of 1E-7 |
Complex Size: | 6 proteins |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
GO Term |
P-value |
A |
B |
I |
T |
nucleolus | 2.3635E-7 | 6 | 211 | 5 | 6292 |
nuclear lumen | 1.0695E-5 | 6 | 453 | 5 | 6292 |
non-membrane-bounded organelle | 1.2371E-5 | 6 | 959 | 6 | 6292 |
intracellular non-membrane-bounded organelle | 1.2371E-5 | 6 | 959 | 6 | 6292 |
organelle lumen | 6.864E-5 | 6 | 660 | 5 | 6292 |
intracellular organelle lumen | 6.864E-5 | 6 | 660 | 5 | 6292 |
membrane-enclosed lumen | 9.1664E-5 | 6 | 700 | 5 | 6292 |
nuclear part | 8.4241E-4 | 6 | 1103 | 5 | 6292 |
nucleus | 1.1592E-3 | 6 | 2041 | 6 | 6292 |
small nucleolar ribonucleoprotein complex | 1.8804E-3 | 6 | 72 | 2 | 6292 |
box H/ACA snoRNP complex | 1.9064E-3 | 6 | 2 | 1 | 6292 |
nuclear outer membrane | 2.6729E-3 | 6 | 86 | 2 | 6292 |
nuclear membrane | 3.389E-3 | 6 | 97 | 2 | 6292 |
ribonucleoprotein complex | 8.9879E-3 | 6 | 514 | 3 | 6292 |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
GO Term |
P-value |
A |
B |
I |
T |
ribosome biogenesis | 2.6536E-8 | 6 | 346 | 6 | 6292 |
ribonucleoprotein complex biogenesis | 4.2465E-8 | 6 | 374 | 6 | 6292 |
cellular component biogenesis | 1.7662E-6 | 6 | 694 | 6 | 6292 |
rRNA processing | 2.3759E-6 | 6 | 128 | 4 | 6292 |
rRNA metabolic process | 3.1205E-6 | 6 | 137 | 4 | 6292 |
ncRNA processing | 1.8849E-5 | 6 | 215 | 4 | 6292 |
ncRNA metabolic process | 3.8238E-5 | 6 | 257 | 4 | 6292 |
RNA processing | 1.7827E-4 | 6 | 380 | 4 | 6292 |
RNA metabolic process | 4.1658E-4 | 6 | 954 | 5 | 6292 |
maturation of SSU-rRNA | 1.2657E-3 | 6 | 59 | 2 | 6292 |
gene expression | 1.746E-3 | 6 | 1283 | 5 | 6292 |
nucleic acid metabolic process | 2.791E-3 | 6 | 1415 | 5 | 6292 |
rRNA pseudouridine synthesis | 3.8098E-3 | 6 | 4 | 1 | 6292 |
nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | 4.5228E-3 | 6 | 1566 | 5 | 6292 |
regulation of transcription, mating-type specific | 4.7604E-3 | 6 | 5 | 1 | 6292 |
cellular nitrogen compound metabolic process | 8.0643E-3 | 6 | 1770 | 5 | 6292 |
nitrogen compound metabolic process | 8.5237E-3 | 6 | 1791 | 5 | 6292 |
pseudouridine synthesis | 8.5551E-3 | 6 | 9 | 1 | 6292 |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
GO Term |
P-value |
A |
B |
I |
T |
pseudouridylate synthase activity | 4.7604E-3 | 6 | 5 | 1 | 6292 |