YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Protein Complex Details

Complex Overview

From Publication: Riffle <i>et al</i>. (2010) (Unpublished Data)
Notes: Complex predicted from the combined set of Gavin (2002), Gavin (2006), Ho (2002) and Krogan (2006); at p-value cutoff of 1E-7
Complex Size: 10 proteins

Complex Member Proteins

Cellular Component Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

cytosolic ribosome 4.4393E-4 10 101 3 6292
ribonucleoprotein complex 6.3595E-4 10 514 5 6292
cytosolic part 7.7269E-4 10 122 3 6292
preribosome 1.2414E-3 10 34 2 6292
ribosomal subunit 2.4976E-3 10 183 3 6292
cytosolic large ribosomal subunit 3.8312E-3 10 60 2 6292
cytosol 8.619E-3 10 284 3 6292
ribosome 9.1321E-3 10 290 3 6292
preribosome, small subunit precursor 9.5019E-3 10 6 1 6292

Biological Process Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

translation 2.6446E-7 10 376 7 6292
ribosomal large subunit assembly 2.9863E-5 10 41 3 6292
ribosomal subunit assembly 7.2637E-5 10 55 3 6292
gene expression 8.885E-5 10 1283 8 6292
ribosome assembly 1.1449E-4 10 64 3 6292
ribosomal large subunit biogenesis 1.1993E-4 10 65 3 6292
organelle assembly 1.4337E-4 10 69 3 6292
cellular protein metabolic process 3.0812E-4 10 1074 7 6292
ribonucleoprotein complex assembly 3.3706E-4 10 92 3 6292
cellular biosynthetic process 3.9961E-4 10 1567 8 6292
protein metabolic process 4.4321E-4 10 1136 7 6292
biosynthetic process 4.7103E-4 10 1602 8 6292
cellular macromolecule biosynthetic process 5.882E-4 10 1187 7 6292
macromolecule biosynthetic process 5.946E-4 10 1189 7 6292
ribosome biogenesis 1.4482E-3 10 346 4 6292
ribonucleoprotein complex biogenesis 1.9363E-3 10 374 4 6292
cellular macromolecular complex assembly 2.4587E-3 10 182 3 6292
GTP biosynthetic process 3.1764E-3 10 2 1 6292
primary metabolic process 5.4001E-3 10 2896 9 6292
cellular macromolecule metabolic process 6.225E-3 10 2285 8 6292
cellular macromolecular complex subunit organization 6.671E-3 10 259 3 6292
macromolecule metabolic process 7.5629E-3 10 2349 8 6292
cellular metabolic process 7.9165E-3 10 3033 9 6292
macromolecular complex assembly 8.3691E-3 10 281 3 6292

Molecular Function Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

structural constituent of ribosome 4.9236E-9 10 212 7 6292
structural molecule activity 1.2936E-7 10 339 7 6292
IMP dehydrogenase activity 4.7611E-3 10 3 1 6292

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle