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View Protein Complex Details

Complex Overview

From Publication: Riffle <i>et al</i>. (2010) (Unpublished Data)
Notes: Complex predicted from the combined set of Gavin (2002), Gavin (2006), Ho (2002) and Krogan (2006); at p-value cutoff of 1E-7
Complex Size: 7 proteins

Complex Member Proteins

Cellular Component Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

cytosolic large ribosomal subunit 1.3775E-9 7 60 5 6292
cytosolic ribosome 1.9761E-8 7 101 5 6292
large ribosomal subunit 3.046E-8 7 110 5 6292
cytosolic part 5.1422E-8 7 122 5 6292
ribosomal subunit 3.9497E-7 7 183 5 6292
cytosol 3.5275E-6 7 284 5 6292
ribosome 3.9127E-6 7 290 5 6292
ribonucleoprotein complex 6.5267E-5 7 514 5 6292
non-membrane-bounded organelle 1.3072E-3 7 959 5 6292
intracellular non-membrane-bounded organelle 1.3072E-3 7 959 5 6292

Biological Process Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

translation 2.5814E-9 7 376 7 6292
cellular protein metabolic process 4.1538E-6 7 1074 7 6292
protein metabolic process 6.1593E-6 7 1136 7 6292
cellular macromolecule biosynthetic process 8.3828E-6 7 1187 7 6292
macromolecule biosynthetic process 8.4824E-6 7 1189 7 6292
gene expression 1.4468E-5 7 1283 7 6292
cellular biosynthetic process 5.8828E-5 7 1567 7 6292
biosynthetic process 6.8686E-5 7 1602 7 6292
cellular macromolecule metabolic process 8.282E-4 7 2285 7 6292
ribosomal large subunit assembly 8.5225E-4 7 41 2 6292
macromolecule metabolic process 1.0051E-3 7 2349 7 6292
ribosomal subunit assembly 1.532E-3 7 55 2 6292
ribosome assembly 2.0698E-3 7 64 2 6292
ribosomal large subunit biogenesis 2.1344E-3 7 65 2 6292
organelle assembly 2.4022E-3 7 69 2 6292
ribonucleoprotein complex assembly 4.2342E-3 7 92 2 6292
primary metabolic process 4.3588E-3 7 2896 7 6292
cellular metabolic process 6.026E-3 7 3033 7 6292
metabolic process 7.9792E-3 7 3157 7 6292

Molecular Function Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

structural constituent of ribosome 4.4752E-11 7 212 7 6292
structural molecule activity 1.2424E-9 7 339 7 6292
RNA binding 1.2524E-5 7 367 5 6292
nucleic acid binding 2.2923E-4 7 666 5 6292
binding 5.2851E-3 7 1294 5 6292

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle