From Publication: | Qiu J, Noble WS (2008) Predicting Co-Complexed Protein Pairs from Heterogeneous Data. PLoS Comput Biol 4(4): e1000054. doi:10.1371/journal.pcbi.1000054 |
Notes: | Classifier used Gene Ontology annotations. [FDR: 0.069] [SVM Score: 0.512794793642] |
Complex Size: | 2 proteins |
Protein |
GO Cellular Component | GO Biological Process | GO Molecular Function |
ENP1 |
|
|
|
NOC2 |
|
|
|
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
GO Term |
P-value |
A |
B |
I |
T |
preribosome | 2.8346E-5 | 2 | 34 | 2 | 6292 |
Noc2p-Noc3p complex | 6.3568E-4 | 2 | 2 | 1 | 6292 |
Noc1p-Noc2p complex | 6.3568E-4 | 2 | 2 | 1 | 6292 |
nucleolus | 1.1194E-3 | 2 | 211 | 2 | 6292 |
Noc complex | 1.5888E-3 | 2 | 5 | 1 | 6292 |
preribosome, small subunit precursor | 1.9064E-3 | 2 | 6 | 1 | 6292 |
preribosome, large subunit precursor | 2.859E-3 | 2 | 9 | 1 | 6292 |
nuclear lumen | 5.1728E-3 | 2 | 453 | 2 | 6292 |
90S preribosome | 5.3968E-3 | 2 | 17 | 1 | 6292 |
ribonucleoprotein complex | 6.6615E-3 | 2 | 514 | 2 | 6292 |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
GO Term |
P-value |
A |
B |
I |
T |
ribosome biogenesis | 3.0157E-3 | 2 | 346 | 2 | 6292 |
ribonucleoprotein complex biogenesis | 3.5243E-3 | 2 | 374 | 2 | 6292 |
establishment of ribosome localization | 8.248E-3 | 2 | 26 | 1 | 6292 |
ribosome localization | 8.248E-3 | 2 | 26 | 1 | 6292 |
ribosomal subunit export from nucleus | 8.248E-3 | 2 | 26 | 1 | 6292 |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
GO Term |
P-value |
A |
B |
I |
T |
snoRNA binding | 9.8303E-3 | 2 | 31 | 1 | 6292 |