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Protein Overview: gi|12851426, gi|...

General Information:
Name(s) found: gi|31980689 [NCBI NR]
gi|12851426 [NCBI NR]
Description(s) found:
Found 9 descriptions.
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  • gi|31980689|ref|NP_056597.2| small nuclear ribonucleoprotein polypeptide A [Mus musculus] [NCBI NR]
  • gi|12851426|dbj|BAB29037.1| unnamed protein product [Mus musculus] [NCBI NR]
    • Organism: Mus musculus
    Length: 287 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATIATMPVP ETRANHTIYI NNLNEKIKKD ELKKSLYAIF SQFGQILDIL VSRIMKMRGQ  60
   61 AFVIFKEVTS ATNALRSMQG FPFYDKPMRI QYAKTDSDII AKMKGTYVER DRKREKRKPK 120
  121 SQETPAAKKA VQVGQLRPWW GLSQPVPGMP PMPQAPRIMH HMPGQPPYMP PPGMIPPPGL 180
  181 APGQIPPGAM PPQQLMPGQM PPAQPLSENP PNHILFLTNL PEETNELMLS MLFNQFPGFK 240
  241 EVRLVPGRHD IAFVEFDNEV QAGAARDALQ GFKITQNNAM KISFAKK

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..111] PSI-BLAST 20.522879 RNA-BINDING DOMAIN OF THE U1A SPLICEOSOMAL PROTEIN U1A117, NMR, 43 STRUCTURES
    2 View Details [112..210] FFAS03 1.38 Crystal Structure of Rat Synapsin I C Domain Complexed to Ca.ATP
    3 View Details [211..287] PSI-BLAST 12.30103 RNA BINDING DOMAIN 2 OF HUMAN U1A PROTEIN, NMR, 20 STRUCTURES

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2 No functions predicted.
    3
    Term Confidence Notes
  • nucleic acid binding
    		•  4.50398990564944 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.97

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle