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Protein Overview: CAP-PJ

General Information:
Name(s) found: CAP-PJ / FBpp0087436 [FlyBase]
Description(s) found:
Found 18 descriptions.
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  • The gene CAP is referred to in FlyBase by the symbol Dmel\CAP (CG18408, FBgn0033504). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 2R:6156528..6194529. It has the cytological map location 46F9-47A1. Based on sequence similarity, it is predicted to have molecular function</span>: vinculin binding. The biological processes in which it is involved are not known. 23 alleles are reported. No phenotypic data is available. It has 17 annotated transcripts and 17 annotated polypeptides. [FlyBase]
    • Organism: Drosophila melanogaster
    Length: 565 amino acids

    Gene Ontology:
    Cellular Component: focal adhesion [ISS]
    Biological Process: NONE FOUND
    Molecular Function: vinculin binding [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSASTPPRRT RPSYKSNGYV SEPEPNYDSD YSTVRYRTQN PHRVQSVSSA VNVRNLNQDE  60
   61 KLYGTMPNPI KSAQNSYKNQ PGRIENYTTG HSSVSEKEKK EWWDEVMDIF NGNLEQSKLS 120
  121 PLYTEGNLSR ALAKESGYTS DSNLVFRKKE VPVSSPLSPV EQKQAYKSLQ AGGEPPLLGF 180
  181 RKPAPEKPRD LDPNAPPIPP QPPVKGLSSY DFPYSTDTVD GSDVNIHFKT PIRHEQRQNL 240
  241 SEEELAIRQA EHMQKLYHEE RRRKYLQELQ DMNSRRHTDN FTPSQKSPIA LNRYDDFPTD 300
  301 VTLKSLVGPK TVARALFNFQ GQTSKELSFR KGDTIYIRRQ IDANWYEGEH NAMIGLLPAS 360
  361 YVEIVSRDGA RTPSKRPSEG QARAKYNFQA QSGIELSLNK GELVTLTRRV DGNWFEGKIA 420
  421 NRKGIFPCSY VEVLTDIGAE DIAARTTTVI TSQSTTNLRP NLDVLRTNIN NEFNTLTQNG 480
  481 AQPPNGILKE TRTLHKTDAL HVDTSSEPLA YRALYKYRPQ NSDELELLEG DVVHVLEKCD 540
  541 DGWFVGTSQR TGCFGTFPGN YVERA

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..205] MSA 5.187996 View MSA. No confident structure predictions are available.
    2 View Details [206..306] deduced N/A No confident structure predictions are available.
    3 View Details [307..565] PSI-BLAST 38.522879 Growth factor receptor-bound protein 2 (GRB2), N- and C-terminal domains; Growth factor receptor-bound protein 2 (GRB2)

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2 No functions predicted.
    3
    Term Confidence Notes
  • binding
    		•  1.13376047180398 bayes_pls_golite062009
  • protein binding
    		•  1.03382488697656 bayes_pls_golite062009
  • signal transducer activity
    		•  0.69727426993974 bayes_pls_golite062009
  • molecular transducer activity
    		•  0.69727426993974 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle