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Protein Overview: Obp56c-PA

General Information:
Name(s) found: Obp56c-PA / FBpp0085674 [FlyBase]
Description(s) found:
Found 11 descriptions.
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  • The gene Odorant-binding protein 56c is referred to in FlyBase by the symbol Dmel\Obp56c (CG30128, FBgn0046879). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 2R:15587678..15588573. It has the cytological map location 56E2. Based on sequence similarity, it is predicted to have molecular function</span>: odorant binding. Based on sequence similarity, it is predicted to be involved in the biological process</span>: sensory perception of chemical stimulus. 2 alleles are reported. No phenotypic data is available. It has 2 annotated transcripts and 2 annotated polypeptides. [FlyBase]
    • Organism: Drosophila melanogaster
    Length: 208 amino acids

    Gene Ontology:
    Cellular Component: cellular_component [ND]
    Biological Process: sensory perception of chemical stimulus [UNKNOWN][ISS]
    transport [IEA]
    Molecular Function: odorant binding [UNKNOWN][ISS][NAS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MYFRASLMAL LCLTLSEFVS KAWTRSLSVS LNMSMTRTLV PDPPNGTENK LSQEMLRACM  60
   61 RRTEISMSQL KLFHMSLMNS DYNNDNDIAP TPVQSIGDCF VSCLYETLDL DRYNVLLEEA 120
  121 FKNQVQTIIQ HEKAEIKECS DLQGKTRCEA AYKLHLCYNH LKTLEAEQRI REILERTEAE 180
  181 NEGFGPEGSD FIDGIQHSGE AMTTAKSE

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..208] PSI-BLAST 25.0 AgamOBP1, and odorant binding protein from Anopheles gambiae complexed with PEG


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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