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View Structure Prediction Details

Protein: Obp56c-PA
Organism: Drosophila melanogaster
Length: 208 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Obp56c-PA.

Description E-value Query
Range
Subject
Range
Obp56c-PB - The gene Odorant-binding protein 56c is referred to in FlyBase by the symbol Dmel\Obp56c (CG30128, F...
202.0 [0..1] [208..1]

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Predicted Domain #1
Region A:
Residues: [1-208]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MYFRASLMAL LCLTLSEFVS KAWTRSLSVS LNMSMTRTLV PDPPNGTENK LSQEMLRACM  60
   61 RRTEISMSQL KLFHMSLMNS DYNNDNDIAP TPVQSIGDCF VSCLYETLDL DRYNVLLEEA 120
  121 FKNQVQTIIQ HEKAEIKECS DLQGKTRCEA AYKLHLCYNH LKTLEAEQRI REILERTEAE 180
  181 NEGFGPEGSD FIDGIQHSGE AMTTAKSE

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 25.0
Match: 2erbA
Description: AgamOBP1, and odorant binding protein from Anopheles gambiae complexed with PEG
Matching Structure (courtesy of the PDB):

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