YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: Obp56c-PB

General Information:
Name(s) found: Obp56c-PB / FBpp0089321 [FlyBase]
Description(s) found:
Found 17 descriptions.
SHOW ALL
  • The gene Odorant-binding protein 56c is referred to in FlyBase by the symbol Dmel\Obp56c (CG30128, FBgn0046879). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 2R:15587678..15588573. It has the cytological map location 56E2. Based on sequence similarity, it is predicted to have molecular function</span>: odorant binding. Based on sequence similarity, it is predicted to be involved in the biological process</span>: sensory perception of chemical stimulus. 2 alleles are reported. No phenotypic data is available. It has 2 annotated transcripts and 2 annotated polypeptides. [FlyBase]
    • Organism: Drosophila melanogaster
    Length: 245 amino acids

    Gene Ontology:
    Cellular Component: cellular_component [ND]
    Biological Process: sensory perception of chemical stimulus [UNKNOWN][ISS]
    transport [IEA]
    Molecular Function: odorant binding [UNKNOWN][ISS][NAS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MYFRASLMAL LCLTLSEFVS KAWVMFFIFY ISFTRSLSVS LNMSMTRTLV PDPPNGTENK  60
   61 LSQEMLRACM RRTEISMSQL KLFHMSLMNS DYNNDNDIAP TPVQSIGDVN NLGDLDFNGN 120
  121 SQMPYLDLKH NEPLQCFVSC LYETLDLDRY NVLLEEAFKN QVQTIIQHEK AEIKECSDLQ 180
  181 GKTRCEAAYK LHLCYNHLKT LEAEQRIREI LERTEAENEG FGPEGSDFID GIQHSGEAMT 240
  241 TAKSE

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..90] deduced N/A No confident structure predictions are available.
    2 View Details [91..245] PSI-BLAST 25.154902 AgamOBP1, and odorant binding protein from Anopheles gambiae complexed with PEG


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle