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Protein Overview: sced-PA, FBpp0307644

General Information:
Name(s) found: FBpp0307644 [FlyBase]
sced-PA / FBpp0085445 [FlyBase]
Description(s) found:
Found 24 descriptions.
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  • type=protein; loc=2R:2545017..2547485; ID=FBpp0307644; name=sced-PB; parent=FBgn0013732,FBtr0336663; dbxref=FlyBase:FBpp0307644,FlyBase_Annotation_IDs:CG3273-PB,REFSEQ:NP_001260728,GB_protein:AGB93261; MD5=692183274d111ad8838a1ac0a46688d4; length=822; release=r5.56; species=Dmel; [FlyBase]
  • The gene scrambled is referred to in FlyBase by the symbol Dmel\sced (CG3273, FBgn0013732). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 2R:2544833..2548129. It has the cytological map location 42C2-42C3. Its molecular function is unknown. There is experimental evidence that it is involved in the biological process</span>: pseudocleavage during syncytial blastoderm formation; actin filament reorganization during cell cycle. 10 alleles are reported. The phenotypes of these alleles are annotated with: cycle 13 embryo; cycle 11 embryo; cycle 12 embryo. It has one annotated transcript and one annotated polypeptide. [FlyBase]
    • Organism: Drosophila melanogaster
    Length: 822 amino acids

    Gene Ontology:
    Cellular Component: centrosome [IDA]
    Biological Process: actin filament reorganization involved in cell cycle [IMP]
    pseudocleavage during syncytial blastoderm formation [IMP]
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDHNEISMTM DAKLDTHDKR PVALRYKTWT RCQVKIEAIK CVPCFLRLSF QAMETESHSQ  60
   61 ECHPAKPISV SVNVPGVSLS LATSRTKQHS YGLFWTQNRR DCFIYFALET ETSCRRHMKW 120
  121 MRKSIKNLEL YRQVFLEQRR LSRGPGGLGP LPNLPETLDA SALSPRVSQI YEEIFDGSRI 180
  181 SRVSIASGIY EEMKPSVMET PSPPPLPAHP YRQRINTFEC AQLGEIARSS TNPESELAKK 240
  241 KKYKNMLDNL FGSSRQKRSG STSEVANEPS DEVLPLYENA PTPEPVLPVK RTSQLNKSQR 300
  301 NSFSSPDLSK LNLLDTFGEY FEAQNHESSM EINISLDESV IEPISRNEII AQISSQLGKA 360
  361 DSLESLNVSE QLPYNFNFSA CNTSTINLIG SHGAVPQSNQ LKKNKILHED LTGYCVMAPI 420
  421 LKATVKDLPP QPGGSTVSTS SGYSTGSYCS STSSCNTEDQ PTKTQIANES DIYEVMHGTS 480
  481 LNSTVGAAAA GFAEHLYENL LAVKAAQELE AQPVGFGLST STPTESPLAP ALPQKGTPKD 540
  541 KTLQQKPEEE NYYQTPRKSI ISVDDKIPSY YPNSCDTLKS KRRSPTEHGP SFRHLVSSKL 600
  601 RRERKENLYI SSPQQIIEQR HKAATISSAS VSAKTKSSTK KTAAHKISDS VYAVTHPVKR 660
  661 PNSTNSNNTH QSNNNNNNEG VDDELLHLTV LKNIDFKFDD SQASEDSCKA KASALPVANE 720
  721 CFVQPNLEKE YEDRFQAAEK ASRLLQKYAT LAKIGHSPSK ALPAPARLEP MIQSVATSNE 780
  781 LQPEGGTMKK FASLPRFKKI DFSPLKMRLN SVLQRNPPSP QH

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..323] deduced N/A No confident structure predictions are available.
    2 View Details [324..427] MSA 1.003967 View MSA. No confident structure predictions are available.
    3 View Details [428..724] deduced N/A No confident structure predictions are available.
    4 View Details [725..822] MSA 1.002973 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle