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Protein Overview: CG1750-PA

General Information:
Name(s) found: CG1750-PA / FBpp0085129 [FlyBase]
Description(s) found:
Found 18 descriptions.
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  • This gene is referred to in FlyBase by the symbol Dmel\CG1750 (CG1750, FBgn0039836). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 3R:27079373..27080622. It has the cytological map location 100B8. Based on sequence similarity, it is predicted to have molecular function</span>: methionyl-tRNA formyltransferase activity. An electronic pipeline based on InterPro domains suggests that it is involved in the biological process</span>: translation. 6 alleles are reported. No phenotypic data is available. It has 2 annotated transcripts and 2 annotated polypeptides. [FlyBase]
    • Organism: Drosophila melanogaster
    Length: 342 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: translation [IEA]
    Molecular Function: methionyl-tRNA formyltransferase activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFCGKSLVNN FYKYKRKVWQ NVIPIAQRCK GTYHPPKILF FGTDNFSLPS LQALHKNCGD  60
   61 RLGVVTSFKS PANCVRTYAE KEKLPLQKWP IDPSVCPQFD LGVVVSFGHL IPGSIINGFP 120
  121 YGMINVHASL LPKWRGAAPI IYAIMKGDAS TGVSIMKIEP HRFDIGDILA QREVAINPDV 180
  181 FMPDLHASLA SLGAELLVDT INNLSVRLKE AKPQDSSRVS YAPKITSKIT EIIWSELSAI 240
  241 EIYTRHRALY GYKNLTTNFL GKQVQLLELR LPEKRVPVQE PGAISYLRKS RSLIIGCAQQ 300
  301 SQLEVLQLRV EGRKPMSAQD FNNGFLKQAR SLSFTENKIA SI

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..342] PSI-BLAST 92.522879 Methionyl-tRNAfmet formyltransferase, C-terminal domain; Methionyl-tRNAfmet formyltransferase

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • methionyl-tRNA formyltransferase activity
    		•  5.51013755462273 bayes_pls_golite062009
  • hydroxymethyl-, formyl- and related transferase activity
    		•  5.19882604023997 bayes_pls_golite062009
  • ligase activity
    		•  2.41579019065074 bayes_pls_golite062009
  • methyltransferase activity
    		•  2.27572765999587 bayes_pls_golite062009
  • transferase activity, transferring one-carbon groups
    		•  2.20102068445328 bayes_pls_golite062009
  • catalytic activity
    		•  2.16003793103722 bayes_pls_golite062009
  • glycine hydroxymethyltransferase activity
    		•  1.99841214906509 bayes_pls_golite062009
  • transferase activity
    		•  1.01502594768782 bayes_pls_golite062009
  • DNA N-glycosylase activity
    		•  0.809924940479886 bayes_pls_golite062009
  • binding
    		•  0.752059276178195 bayes_pls_golite062009
  • nucleic acid binding
    		•  0.698214709916015 bayes_pls_golite062009
  • DNA binding
    		•  0.421388681127685 bayes_pls_golite062009
  • phosphoribosylglycinamide formyltransferase activity
    		•  0.0567687847434473 bayes_pls_golite062009
  • hydrolase activity, hydrolyzing N-glycosyl compounds
    		•  0.0124799003650303 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.92

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle