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View Structure Prediction Details

Protein: CG1750-PA
Organism: Drosophila melanogaster
Length: 342 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CG1750-PA.

Description E-value Query
Range
Subject
Range
FMT_SHIDS - Methionyl-tRNA formyltransferase OS=Shigella dysenteriae serotype 1 (strain Sd197) GN=fmt PE=3 SV=1
339.0 [0..32] [341..1]

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Predicted Domain #1
Region A:
Residues: [1-342]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFCGKSLVNN FYKYKRKVWQ NVIPIAQRCK GTYHPPKILF FGTDNFSLPS LQALHKNCGD  60
   61 RLGVVTSFKS PANCVRTYAE KEKLPLQKWP IDPSVCPQFD LGVVVSFGHL IPGSIINGFP 120
  121 YGMINVHASL LPKWRGAAPI IYAIMKGDAS TGVSIMKIEP HRFDIGDILA QREVAINPDV 180
  181 FMPDLHASLA SLGAELLVDT INNLSVRLKE AKPQDSSRVS YAPKITSKIT EIIWSELSAI 240
  241 EIYTRHRALY GYKNLTTNFL GKQVQLLELR LPEKRVPVQE PGAISYLRKS RSLIIGCAQQ 300
  301 SQLEVLQLRV EGRKPMSAQD FNNGFLKQAR SLSFTENKIA SI

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 92.522879
Match: 1fmtA
Description: Methionyl-tRNAfmet formyltransferase, C-terminal domain; Methionyl-tRNAfmet formyltransferase
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
methionyl-tRNA formyltransferase activity 5.51013755462273 bayes_pls_golite062009
hydroxymethyl-, formyl- and related transferase activity 5.19882604023997 bayes_pls_golite062009
ligase activity 2.41579019065074 bayes_pls_golite062009
methyltransferase activity 2.27572765999587 bayes_pls_golite062009
transferase activity, transferring one-carbon groups 2.20102068445328 bayes_pls_golite062009
catalytic activity 2.16003793103722 bayes_pls_golite062009
glycine hydroxymethyltransferase activity 1.99841214906509 bayes_pls_golite062009
transferase activity 1.01502594768782 bayes_pls_golite062009
DNA N-glycosylase activity 0.809924940479886 bayes_pls_golite062009
binding 0.752059276178195 bayes_pls_golite062009
nucleic acid binding 0.698214709916015 bayes_pls_golite062009
DNA binding 0.421388681127685 bayes_pls_golite062009
phosphoribosylglycinamide formyltransferase activity 0.0567687847434473 bayes_pls_golite062009
hydrolase activity, hydrolyzing N-glycosyl compounds 0.0124799003650303 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle