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Protein Overview: Obp93a-PB

General Information:
Name(s) found: Obp93a-PB / FBpp0089252 [FlyBase]
Description(s) found:
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  • gi|45553449|ref|NP_996254.1| Odorant-binding protein 93a, isoform B [Drosophila melanogaster] [NCBI NR]
  • gi|45446577|gb|AAS65190.1| Odorant-binding protein 93a, isoform B [Drosophila melanogaster] [NCBI NR]
  • The gene Odorant-binding protein 93a is referred to in FlyBase by the symbol Dmel\Obp93a (CG17284, FBgn0038859). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 3R:16954672..16955439. It has the cytological map location 93C1. Based on sequence similarity, it is predicted to have molecular function</span>: odorant binding. Based on sequence similarity, it is predicted to be involved in the biological process</span>: sensory perception of chemical stimulus. 2 alleles are reported. No phenotypic data is available. It has 2 annotated transcripts and 2 annotated polypeptides. [FlyBase]
  • (AAS65190) CG17284-PB [DrosMelano7227.FASTAC.txt]
  • (AE003733) CG17284 gene product [Drosophila melanogaster] [yeastflysequest.fasta]
  • CG17284-PB, isoform B [Drosophila melanogaster]gi|45553449|ref|NP_996254.1| CG17284-PB [Drosophila melanogaster] [nrdb_11152004_Chlamydomonas]
  • type=protein; loc=3R:complement(16954672..16954871,16954926..16955082,16955150..16955338); ID=FBpp0089252; name=Obp93a-PB; parent=FBgn0038859,FBtr0084031; dbxref=FlyBase:FBpp0089252,FlyBase_Annotation_IDs:CG17284-PB,GB_protein:AAS65190.1,REFSEQ:NP_996254, [fly-100309-contam.fasta]
  • CG17284-PB, isoform B [Drosophila melanogaster] [nr-271106-contam.fasta]
  • Odorant-binding protein 93a CG17284-PB, isoform B [Drosophila melanogaster] [nr-271106-contam.fasta]
  • type=protein; loc=3R:complement(16954672..16954871,16954926..16955082,16955150..16955338); ID=FBpp0089252; name=Obp93a-PB; parent=FBgn0038859,FBtr0084031; dbxref=FlyBase:FBpp0089252,FlyBase_Annotation_IDs:CG17284-PB,GB_protein:AAS65190.1,REFSEQ:NP_996254,GB_protein:AAS65190; MD5=a4cd2fe6bbbe59f9c982744e49f45c5b; length=181; release=r5.16; species=Dmel; [fly-contam-His-TEV-Tub4complex.fasta]
  • type=protein; loc=3R:complement(16954672..16954871,16954926..16955082,16955150..16955338); ID=FBpp0089252; name=Obp93a-PB; parent=FBgn0038859,FBtr0084031; dbxref=FlyBase:FBpp0089252,FlyBase_Annotation_IDs:CG17284-PB,GB_protein:AAS65190.1,REFSEQ:NP_996254,GB_protein:AAS65190; MD5=a4cd2fe6bbbe59f9c982744e49f45c5b; length=181; release=r5.21; species=Dmel; [Other_drosophila_na_09-09-2009_reversed.fasta]
  • Odorant-binding protein 93a, isoform B OS=Drosophila melanogaster GN=Obp93a PE=2 SV=1 [UniProt_drosophila_07-01-2011_reversed.fasta]
    • Organism: Drosophila melanogaster
    Length: 181 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: sensory perception of chemical stimulus [UNKNOWN]
    transport [IEA]
    Molecular Function: odorant binding [UNKNOWN][IEA][NAS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKTSNKIVFL LLQLNIWQLS SCCDVQKNDK AINSCRKSLL GNNSTNSNGE VRNLKSDKVA  60
   61 LHACIAECSF RTNGFLLSNG TVNTQALQKS YQQRYKNDPN MSQLMLKSLN SCTDYARKRV 120
  121 QEFQWMPKKG DCDFYPATLL ACVMEKVYIN CPTSKWKNTS DCTAMWKYLV ACDDVASNKK 180
  181 K

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..181] FFAS03 2.01 Complex of Drosophila odorant binding protein LUSH with butanol

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • odorant binding
    		•  4.30384487978807 bayes_pls_golite062009
  • pheromone binding
    		•  2.39768039305435 bayes_pls_golite062009
  • binding
    		•  1.28042629944593 bayes_pls_golite062009
  • phenylalkylamine binding
    		•  0.936465350042035 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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