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View Structure Prediction Details

Protein: Obp93a-PB
Organism: Drosophila melanogaster
Length: 181 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Obp93a-PB.

Description E-value Query
Range
Subject
Range
Obp93a-PA - The gene Odorant-binding protein 93a is referred to in FlyBase by the symbol Dmel\Obp93a (CG17284, F...
168.0 [0..19] [181..34]
gi|40204884 - gi|40204884|emb|CAF02089.1| putative dimer odorant-binding protein OBP17284 [Drosophila pseudoobscur...
162.0 [0..8] [180..137]
gi|116126848, gi... - gi|118787535|ref|XP_316128.2| ENSANGP00000023688 [Anopheles gambiae str. PEST], gi|116126848|gb|EAA4...
gi|40019423 - gi|40019423|emb|CAF02005.1| odorant-binding protein OBPjj6b [Anopheles gambiae]
130.0 [0..17] [172..162]

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Predicted Domain #1
Region A:
Residues: [1-181]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKTSNKIVFL LLQLNIWQLS SCCDVQKNDK AINSCRKSLL GNNSTNSNGE VRNLKSDKVA  60
   61 LHACIAECSF RTNGFLLSNG TVNTQALQKS YQQRYKNDPN MSQLMLKSLN SCTDYARKRV 120
  121 QEFQWMPKKG DCDFYPATLL ACVMEKVYIN CPTSKWKNTS DCTAMWKYLV ACDDVASNKK 180
  181 K

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 2.01
Match: 1oohA
Description: Complex of Drosophila odorant binding protein LUSH with butanol
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
odorant binding 4.30384487978807 bayes_pls_golite062009
pheromone binding 2.39768039305435 bayes_pls_golite062009
binding 1.28042629944593 bayes_pls_golite062009
phenylalkylamine binding 0.936465350042035 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle